You need to set your LD_LIBRARY_PATH to ~/lib/openmpi-1.3.3/MAC/lib, and your PATH to ~/lib/openmpi-1.3.3/MAC/bin
It should then run fine. On Wed, Dec 9, 2009 at 6:29 AM, Andrew McBride <andrew.mcbr...@uct.ac.za>wrote: > Hi > > I've installed trilinos using the openmpi 1.3.3 libraries. I'm configuring > openmpi as follows: > /configure CXX=/usr/local/bin/g++ CC=/usr/local/bin/gcc > F77=/usr/local/bin/gfortran - > prefix=/Users/andrewmcbride/lib/openmpi-1.3.3/MAC > > Trilinos compiles without problem but the test fail (see below). I'm > running a Mac with OSX10.6 (snow leopard). The mpi tests seem to run fine: > > bash-3.2$ ~/lib/openmpi-1.3.3/MAC/bin/mpicc hello_c.c > bash-3.2$ ~/lib/openmpi-1.3.3/MAC/bin/mpirun -np 2 hello_ > bash-3.2$ ~/lib/openmpi-1.3.3/MAC/bin/mpirun -np 2 a.out > Hello, world, I am 0 of 2 > Hello, world, I am 1 of 2 > > I'm convinced that the problem has to do with the paths and different > versions of mpi lurking on the mac. I don't want to use the version of > openmpi that comes bundled with the mac for a different reason. > > Any help would be most appreciated > > Andrew > > > Start testing: Dec 09 12:18 SAST > ---------------------------------------------------------- > 1/534 Testing: Teuchos_BLAS_test_MPI_1 > 1/534 Test: Teuchos_BLAS_test_MPI_1 > Command: "/Users/andrewmcbride/lib/openmpi-1.3.3/MAC/bin/mpiexec" "-np" "1" > "/Users/andrewmcbride/lib/trilinos-10.0.2-Source/MAC_SL/packages/teuchos/test/BLAS/Teuchos_BLAS_test.exe" > "-v" > Directory: > /Users/andrewmcbride/lib/trilinos-10.0.2-Source/MAC_SL/packages/teuchos/test/BLAS > "Teuchos_BLAS_test_MPI_1" start time: Dec 09 12:18 SAST > Output: > ---------------------------------------------------------- > [macs-mac.local:71058] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in > file runtime/orte_init.c at line 125 > -------------------------------------------------------------------------- > It looks like orte_init failed for some reason; your parallel process is > likely to abort. There are many reasons that a parallel process can > fail during orte_init; some of which are due to configuration or > environment problems. This failure appears to be an internal failure; > here's some additional information (which may only be relevant to an > Open MPI developer): > > orte_ess_base_select failed > --> Returned value Not found (-13) instead of ORTE_SUCCESS > -------------------------------------------------------------------------- > *** An error occurred in MPI_Init > *** before MPI was initialized > *** MPI_ERRORS_ARE_FATAL (your MPI job will now abort) > [macs-mac.local:71058] Abort before MPI_INIT completed successfully; not > able to guarantee that all other processes were killed! > -------------------------------------------------------------------------- > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users >
