Hello, I would like to build OMPI V1.4.2 and make it available to our users at the Supercomputing Center at TAMU. Our system is a 2-socket, 4-core Nehalem @2.8GHz, 24GiB DRAM / node, 324 nodes connected to 4xQDR Voltaire fabric, CentOS/RHEL 5.4.
I have been trying to find the following information : 1) high-resolution timers: how do I specify the HRT linux timers in the --with-timer=TYPE line of ./configure ? 2) I have installed blcr V0.8.2 but when I try to built OMPI and I point to the full installation it complains it cannot find it. Note that I build BLCR with GCC but I am building OMPI with Intel compilers (V11.1) 3) Does OMPI by default use SHM for intra-node message IPC but revert to IB for inter-node ? 4) How could I select the high-speed transport, say DAPL or OFED IB verbs ? Is there any preference as to the specific high-speed transport over QDR IB? 5) When we launch MPI jobs via PBS/TORQUE do we have control on the task and thread placement on nodes/cores ? 6) Can we suspend/restart cleanly OMPI jobs with the above scheduler ? Any caveats on suspension / resumption of OMPI jobs ? 7) Do you have any performance data comparing OMPI vs say MVAPICVHv2 and IntelMPI ? This is not a political issue since I am groing to be providing all these MPI stacks to our users. Thank you so much for the great s/w ... best Michael % -------------------------------------------------------------------- \ % Michael E. Thomadakis, Ph.D. Senior Lead Supercomputer Engineer/Res \ % E-mail: miket AT tamu DOT edu Texas A&M University \ % web: http://alphamike.tamu.edu Supercomputing Center \ % Voice: 979-862-3931 Teague Research Center, 104B \ % FAX: 979-847-8643 College Station, TX 77843, USA \ % -------------------------------------------------------------------- \