Thank you: this is very enlightening.
I will try this and let you know...
Ghislain.
Le 9 sept. 2011 à 18:00, Eugene Loh a écrit :
>
>
> On 9/8/2011 11:47 AM, Ghislain Lartigue wrote:
>> I guess you're perfectly right!
>> I will try to test it tomorrow by putting a call system("wait(X)) befor the
>> barrier!
> What does "wait(X)" mean?
>
> Anyhow, here is how I see your computation:
>
> A) The first barrier simply synchronizes the processes.
> B) Then you start a bunch of non-blocking, point-to-point messages.
> C) Then another barrier.
> D) Finally, the point-to-point messages are completed.
>
> Your mental model might be that A, B, and C should be fast and that D should
> take a long time. The reality may be that the completion of all those
> messages is actually taking place during C.
>
> How about the following?
>
> Barrier
> t0 = MPI_Wtime()
> start all non-blocking messages
> t1 = MPI_Wtime()
> Barrier
> t2 = MPI_Wtime()
> complete all messages
> t3 = MPI_Wtime()
> Barrier
> t4 = MPI_Wtime()
>
> Then, look at the data from all the processes graphically. Compare the
> picture to the same experiment, but with middle Barrier missing. Presumably,
> the full iteration will take roughly as long in both cases. The difference,
> I might expect, would be that with the middle barrier present, it gets all
> the time and the message-completion is fast. Without the middle barrier, the
> message completion is slow. So, message completion is taking a long time
> either way and the only difference is whether it's taking place during your
> MPI_Test loop or during what you thought was only a barrier.
>
> A simple way of doing all this is to run with a time-line profiler... some
> MPI performance analysis tool. You won't have to instrument the code, dump
> timings, or figure out graphics. Just look at pretty pictures! There is
> some description of tool candidates in the OMPI FAQ at
> http://www.open-mpi.org/faq/?category=perftools
>> PS:
>> if anyone has more information about the implementation of the MPI_IRECV()
>> procedure, I would be glad to learn more about it!
> I don't know how much detail you want here, but I suspect not much detail is
> warranted. There is a lot of complexity here, but I think a few key ideas
> will help.
>
> First, I'm pretty sure you're sending "long" messages. OMPI usually sends
> such messages by queueing up a request. These requests can, in the general
> case, be "progressed" whenever an MPI call is made. So, whenever you make an
> MPI call, get away from the thought that you're doing one specific thing, as
> specified by the call and its arguments. Think instead that you will also be
> looking around to see whatever other MPI work can be progressed.
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