Thank you, that worked perfectly, and thanks for the explanation as well. Best, Stephen
On Tue, Jul 24, 2012 at 7:58 AM, David Warren <war...@atmos.washington.edu>wrote: > Instead of sudo make install do > sudo bash > source /opt/intel/bin/compilervars.sh intel64 > make install > > Once you sudo you are starting a new shell as root, not a subshell. So, > your environment does not go with it. You need to become root, then set the > environment. > > On Tue, Jul 24, 2012 at 7:47 AM, Stephen J. Barr > <stephenjb...@gmail.com>wrote: > >> Greetings, >> >> I am working on building openmpi-1.6 on ubuntu 12.04 using the intel >> compiler suite. My configure command was: >> >> ./configure --prefix=/usr/local/lib CC=icc CXX=icpc F77=ifort FC=ifort >> >> which completed successfully, as did 'make all' >> >> I am having trouble with the 'sudo make install' step. Specifically, >> >> make[2]: Entering directory `/home/stevejb/apps/openmpi-1.6/ompi/mpi/cxx' >> make[3]: Entering directory `/home/stevejb/apps/openmpi-1.6/ompi/mpi/cxx' >> test -z "/usr/local/lib/lib" || /bin/mkdir -p "/usr/local/lib/lib" >> /bin/bash ../../../libtool --mode=install /usr/bin/install -c >> libmpi_cxx.la '/usr/local/lib/lib' >> libtool: install: warning: relinking `libmpi_cxx.la' >> libtool: install: (cd /home/stevejb/apps/openmpi-1.6/ompi/mpi/cxx; >> /bin/bash /home/stevejb/apps/openmpi-1.6/libtool --silent --tag CXX >> --mode=relink icpc -O3 -DNDEBUG -finline-functions -pthread -version-info >> 1:1:0 -export-dynamic -o libmpi_cxx.la -rpath /usr/local/lib/lib >> mpicxx.lo intercepts.lo comm.lo datatype.lo win.lo file.lo ../../../ompi/ >> libmpi.la -lrt -lnsl -lutil ) >> /home/stevejb/apps/openmpi-1.6/libtool: line 8979: icpc: command not found >> libtool: install: error: relink `libmpi_cxx.la' with the above command >> before installing it >> make[3]: *** [install-libLTLIBRARIES] Error 1 >> make[3]: Leaving directory `/home/stevejb/apps/openmpi-1.6/ompi/mpi/cxx' >> make[2]: *** [install-am] Error 2 >> make[2]: Leaving directory `/home/stevejb/apps/openmpi-1.6/ompi/mpi/cxx' >> make[1]: *** [install-recursive] Error 1 >> make[1]: Leaving directory `/home/stevejb/apps/openmpi-1.6/ompi' >> make: *** [install-recursive] Error 1 >> >> >> It seems to be a similar problem to this thread: >> http://www.open-mpi.org/community/lists/users/2010/11/14913.php but I >> cannot seem to get it resolved. From what I can tell, libtool cannot figure >> out where icpc is. From what I know, that location is set in my .bashrc >> script with the line: >> >> source /opt/intel/bin/compilervars.sh intel64 >> >> In addition, I explicitly set it as: >> >> export PATH=$PATH:/opt/intel/composer_xe_2011_sp1.11.339/bin/intel64/ >> >> What am I missing so that I can get libtool to see where icpc is? >> >> Thanks and best regards, >> Stephen >> >> _______________________________________________ >> users mailing list >> us...@open-mpi.org >> http://www.open-mpi.org/mailman/listinfo.cgi/users >> > > > > -- > David Warren > University of Washington > 206 543-0954 > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users >
