Dear all, I came across another small issue while I was compiling Open MPI 1.7.4 using PGI 14.2 and building the support for Mellanox Hierarchical Collectives (--with-hcoll). Here you how configure Open MPI:
export MXM_DIR=/opt/mellanox/mxm export KNEM_DIR=$(find /opt -maxdepth 1 -type d -name "knem*" -print0) export FCA_DIR=/opt/mellanox/fca export HCOLL_DIR=/opt/mellanox/hcoll ../configure CC=pgcc CXX=pgCC FC=pgf90 F90=pgf90 --prefix=/usr/local/Cluster-Users/fs395/openmpi-1.7.4/pgi-14.2_cuda-6.0RC --enable-mpirun-prefix-by-default --with-hcoll=$HCOLL_DIR --with-fca=$FCA_DIR --with-mxm=$MXM_DIR --with-knem=$KNEM_DIR --with-slurm=/usr/local/Cluster-Apps/slurm --with-cuda=$CUDA_INSTALL_PATH At some point the compile process fails with this error: make[2]: Leaving directory `/home/fs395/archive/openmpi-1.7.4/build/ompi/mca/coll/hierarch' Making all in mca/coll/hcoll make[2]: Entering directory `/home/fs395/archive/openmpi-1.7.4/build/ompi/mca/coll/hcoll' CC coll_hcoll_module.lo CC coll_hcoll_component.lo CC coll_hcoll_rte.lo CC coll_hcoll_ops.lo CCLD mca_coll_hcoll.la pgcc-Error-Unknown switch: -pthread make[2]: *** [mca_coll_hcoll.la] Error 1 make[2]: Leaving directory `/home/fs395/archive/openmpi-1.7.4/build/ompi/mca/coll/hcoll' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/fs395/archive/openmpi-1.7.4/build/ompi' make: *** [all-recursive] Error 1 Attached the configure.log and the make.log collected as reported on the website. Using google I found an old post referring to the same problem. Here few relevant links: http://www.open-mpi.org/community/lists/users/2009/03/8687.php http://www.open-mpi.org/community/lists/users/2010/09/14229.php http://www.open-mpi.org/community/lists/users/2009/04/8911.php I have no problem to use a fake wrapper or the "-noswitcherror" compiler pgf90 flag. I wonder if this procedure will affect in some way the MPI built and I have to carry on this flag also when I compile my applications. Is there any way to fix libtool so Open MPI can build itself properly? Thanks Filippo -- Mr. Filippo SPIGA, M.Sc. http://www.linkedin.com/in/filippospiga ~ skype: filippo.spiga «Nobody will drive us out of Cantor's paradise.» ~ David Hilbert ***** Disclaimer: "Please note this message and any attachments are CONFIDENTIAL and may be privileged or otherwise protected from disclosure. The contents are not to be disclosed to anyone other than the addressee. Unauthorized recipients are requested to preserve this confidentiality and to advise the sender immediately of any error in transmission."
