Dear Jeff, Our updates of OpenMPI to 1.8.3 (and 1.8.4) were all OK using Fedora >= 17 and system gcc compilers on ia32 or ia64 machines.
However, the "make all" step failed using Fedora 14
with a beta gcc 5.0 compiler on an ia32 machine
with message like:
Error: symbol `Lhwloc1' is already defined
A roundabout way to solve it was perform, first,
a separated installation of the hwloc package (we use
Release v1.10.0 (stable)) and, second, configure
OpenMPI using its flag:
--with-hwloc=${HWLOC_HOME}
although, in this way, the include and library path
must be given, e.g.
export CFLAGS="-I/usr/beta/hwloc/include" ; echo ${CFLAGS}
export LDFLAGS="-L/usr/beta/hwloc/lib" ; echo ${LDFLAGS}
export LIBS="-lhwloc" ; echo ${LIBS}
In order to verify that the hwloc works OK, it would be useful
to include in the OpenMPI distribution a simple test like
$ gcc ${CFLAGS} ${LDFLAGS} -o hwloc-hello.exe hwloc-hello.c ${LIBS}
$ ./hwloc-hello.exe
(we apologize to forget to use the --with-hwloc-libdir flag ...).
With this previous step we could overcome the fatal error
in the configuration step related to the hwloc package.
This (fixed) trouble in the configuration step is the same
as the reported as:
Open MPI 1.8.1: "make all" error: symbol `Lhwloc1' is already defined
on 2014-08-12 15:08:38
Regards,
Jorge.
----- Mensaje original -----
> De: "Jorge D'Elia" <jde...@intec.unl.edu.ar>
> Para: "Open MPI Users" <us...@open-mpi.org>
> Enviado: Martes, 12 de Agosto 2014 16:08:38
> Asunto: Re: [OMPI users] Open MPI 1.8.1: "make all" error: symbol `Lhwloc1'
> is already defined
>
> Dear Jeff,
>
> These new versions of the tgz files replace the previous ones:
> I had used an old outdated session environment. However, the
> configuration and installation was OK again in each case.
> Sorry for the noise caused by the previous tgz files.
>
> Regards,
> Jorge.
>
> ----- Mensaje original -----
> > De: "Jorge D'Elia" <jde...@intec.unl.edu.ar>
> > Para: "Open MPI Users" <us...@open-mpi.org>
> > Enviados: Martes, 12 de Agosto 2014 15:16:19
> > Asunto: Re: [OMPI users] Open MPI 1.8.1: "make all" error: symbol `Lhwloc1'
> > is already defined
> >
> > Dear Jeff,
> >
> > ----- Mensaje original -----
> > > De: "Jeff Squyres (jsquyres)" <jsquy...@cisco.com>
> > > Para: "Open MPI User's List" <us...@open-mpi.org>
> > > Enviado: Lunes, 11 de Agosto 2014 11:47:29
> > > Asunto: Re: [OMPI users] Open MPI 1.8.1: "make all" error: symbol
> > > `Lhwloc1'
> > > is already defined
> > >
> > > The problem appears to be occurring in the hwloc component in OMPI.
> > > Can you download hwloc 1.7.2 (standalone) and try to build that on
> > > the target machine and see what happens?
> > >
> > > http://www.open-mpi.org/software/hwloc/v1.7/
> >
> > OK. Just in case I tried both version 1.7.2 and 1.9 (stable).
> > Both gave no errors in the configuration or installation.
> > Attached a *.tgz file for each case. Greetings. Jorge.
> >
> >
> > > On Aug 10, 2014, at 11:16 AM, Jorge D'Elia <jde...@intec.unl.edu.ar>
> > > wrote:
> > >
> > > > Hi,
> > > >
> > > > I tried to re-compile Open MPI 1.8.1 version for Linux
> > > > on an ia32 machine with Fedora 14 although using the
> > > > last version of Gfortran (Gfortran 4.10 is required
> > > > by a user program which runs ok).
> > > >
> > > > However, the "make all" phase breaks with the
> > > > error message:
> > > >
> > > > Error: symbol `Lhwloc1' is already defined
> > > >
> > > > I attached a tgz file (tar -zcvf) with:
> > > >
> > > > Output "configure.txt" from "./configure" Open MPI phase;
> > > > The "config.log" file from the top-level Open MPI directory;
> > > > Output "make.txt" from "make all" to build Open MPI;
> > > > Output "make-v1.txt" from "make V=1" to build Open MPI;
> > > > Outputs from cat /proc/version and cat /proc/cpuinfo
> > > >
> > > > Please, any clue in order to fix?
> > > >
> > > > Regards in advance.
> > > > Jorge.
> > > >
> > > > --
> > > > CIMEC (UNL-CONICET) Predio CONICET-Santa Fe, Colectora Ruta Nac 168,
> > > > Paraje El Pozo, S3000GLN Santa Fe, ARGENTINA, http://www.cimec.org.ar/
> > > > Tel +54 342 451.15.94/95 ext 1018, fax: +54-342-451.11.69
> > > > <symbol-already-defined.tgz>_______________________________________________
> > > > users mailing list
> > > > us...@open-mpi.org
> > > > Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users
> > > > Link to this post:
> > > > http://www.open-mpi.org/community/lists/users/2014/08/24953.php
> > >
> > >
> > > --
> > > Jeff Squyres
> > > jsquy...@cisco.com
> > > For corporate legal information go to:
> > > http://www.cisco.com/web/about/doing_business/legal/cri/
> > >
> > > _______________________________________________
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> > > Link to this post:
> > > http://www.open-mpi.org/community/lists/users/2014/08/24975.php
> > >
> > _______________________________________________
> > users mailing list
> > us...@open-mpi.org
> > Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users
> > Link to this post:
> > http://www.open-mpi.org/community/lists/users/2014/08/25002.php
>
> --
> CIMEC (UNL-CONICET) Predio CONICET-Santa Fe, Colectora Ruta Nac 168,
> Paraje El Pozo, S3000GLN Santa Fe, ARGENTINA, http://www.cimec.org.ar/
> Tel +54 342 451.15.94/95 ext 1018, fax: +54-342-451.11.69
>
> _______________________________________________
> users mailing list
> us...@open-mpi.org
> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users
> Link to this post:
> http://www.open-mpi.org/community/lists/users/2014/08/25005.php
hwloc-hello.tgz
Description: application/compressed-tar
