Hi Gilles, Yes, I did. It was ignored AFAICT. I did not look for the reason - only so many hours in the day.
Regards, Charlie > On Apr 24, 2018, at 8:07 AM, <gil...@rist.or.jp> <gil...@rist.or.jp> wrote: > > Charles, > > have you tried to configure --with-pmix-libdir=/.../lib64 ? > > Cheers, > > Gilles > > ----- Original Message ----- >> I´ll add that when building OpenMPI 3.0.0 with an external PMIx, I > found that the OpenMPI configure script only looks in “lib” for the the > pmix library but the pmix configure/build uses “lib64” (as it should on > a 64-bit system) so the configure script falls back to the internal PMIx. > As Robert suggested, check your config.log for “not found” messages. >> >> In my case, I simply added a “lib -> lib64” symlink in the PMIx > installation directory rather than alter the configure script and that > did the trick. >> >> Good luck, >> >> Charlie >> >>> On Apr 23, 2018, at 6:07 PM, r...@open-mpi.org wrote: >>> >>> Hi Michael >>> >>> Looks like the problem is that you didn´t wind up with the external > PMIx. The component listed in your error is the internal PMIx one which > shouldn´t have built given that configure line. >>> >>> Check your config.out and see what happened. Also, ensure that your > LD_LIBRARY_PATH is properly pointing to the installation, and that you > built into a “clean” prefix. >>> >>> >>>> On Apr 23, 2018, at 12:01 PM, Michael Di Domenico <mdidomenico4@ > gmail.com> wrote: >>>> >>>> i'm trying to get slurm 17.11.5 and openmpi 3.0.1 working with pmix. >>>> >>>> everything compiled, but when i run something it get >>>> >>>> : symbol lookup error: /openmpi/mca_pmix_pmix2x.so: undefined > symbol: >>>> opal_libevent2022_evthread_use_pthreads >>>> >>>> i more then sure i did something wrong, but i'm not sure what, here > 's what i did >>>> >>>> compile libevent 2.1.8 >>>> >>>> ./configure --prefix=/libevent-2.1.8 >>>> >>>> compile pmix 2.1.0 >>>> >>>> ./configure --prefix=/pmix-2.1.0 --with-psm2 >>>> --with-munge=/munge-0.5.13 --with-libevent=/libevent-2.1.8 >>>> >>>> compile openmpi >>>> >>>> ./configure --prefix=/openmpi-3.0.1 --with-slurm=/slurm-17.11.5 >>>> --with-hwloc=external --with-mxm=/opt/mellanox/mxm >>>> --with-cuda=/usr/local/cuda --with-pmix=/pmix-2.1.0 >>>> --with-libevent=/libevent-2.1.8 >>>> >>>> when i look at the symbols in the mca_pmix_pmix2x.so library the >>>> function is indeed undefined (U) in the output, but checking ldd >>>> against the library doesn't show any missing >>>> >>>> any thoughts? >>>> _______________________________________________ >>>> users mailing list >>>> users@lists.open-mpi.org >>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__lists.open-2Dmpi.org_mailman_listinfo_users&d=DwIGaQ&c=pZJPUDQ3SB9JplYbifm4nt2lEVG5pWx2KikqINpWlZM&r=HOtXciFqK5GlgIgLAxthUQ&m=XE6hInyZVJ5VMrO5vdTEKEw3pZBBVnLE7U8Nm67zj2M&s=_sgJVrkRzlv7dIYMvtMfj26AJdbH-fcOOarmN7PyJCI&e= > >>> >>> _______________________________________________ >>> users mailing list >>> users@lists.open-mpi.org >>> https://urldefense.proofpoint.com/v2/url?u=https-3A__lists.open-2Dmpi.org_mailman_listinfo_users&d=DwIGaQ&c=pZJPUDQ3SB9JplYbifm4nt2lEVG5pWx2KikqINpWlZM&r=HOtXciFqK5GlgIgLAxthUQ&m=XE6hInyZVJ5VMrO5vdTEKEw3pZBBVnLE7U8Nm67zj2M&s=_sgJVrkRzlv7dIYMvtMfj26AJdbH-fcOOarmN7PyJCI&e= > >> >> _______________________________________________ >> users mailing list >> users@lists.open-mpi.org >> https://urldefense.proofpoint.com/v2/url?u=https-3A__lists.open-2Dmpi.org_mailman_listinfo_users&d=DwIFag&c=pZJPUDQ3SB9JplYbifm4nt2lEVG5pWx2KikqINpWlZM&r=HOtXciFqK5GlgIgLAxthUQ&m=0XUVnlQfzGhlRDSBAm8nGvZt27jITo3r1oX9_vg639w&s=ErD6RckR-Uvdpj4CTtNvT9iZck285Vdf6sgYskQ_Z-k&e= > _______________________________________________ > users mailing list > users@lists.open-mpi.org > https://urldefense.proofpoint.com/v2/url?u=https-3A__lists.open-2Dmpi.org_mailman_listinfo_users&d=DwIFag&c=pZJPUDQ3SB9JplYbifm4nt2lEVG5pWx2KikqINpWlZM&r=HOtXciFqK5GlgIgLAxthUQ&m=0XUVnlQfzGhlRDSBAm8nGvZt27jITo3r1oX9_vg639w&s=ErD6RckR-Uvdpj4CTtNvT9iZck285Vdf6sgYskQ_Z-k&e= _______________________________________________ users mailing list users@lists.open-mpi.org https://lists.open-mpi.org/mailman/listinfo/users
