Hi As it seems the atom cores (black circles) that are sketched by plotrho code have identical sizes for different atoms. So it can make some plots that have less taste for a chemist. For example in my system I have C-C and C-H bonds with 1.4 and 1.1 angstrom lengths respectively; I can see the density of electrons between the two carbon atoms clearly however for the C-H the two atom cores are tangent to each other and one cannot see the density of electrons between the two atoms as clear as the former case. I 'd better mention that I can understand that there is a chemical bond with the lines (contours) that come from the side of the circles but it would be nicer if they had different sizes. Does it seem sensible to make a bit change in the code ? or any comment to make the plot nicer ? Many thanks, Sincerely Yours.
Ciao, m ---------------------------------------- Masoud Nahali International School for Advanced Studies (SISSA) masoud.nahali at gmail.com alum.sharif.edu/~m_nahali -------------- next part -------------- An HTML attachment was scrubbed... URL: http://www.democritos.it/pipermail/pw_forum/attachments/20120727/b0ef17b2/attachment.htm
