On 23/12/2015 11:53, Ridwan Agbaoye wrote:

Does this answers work for all systems be it FCC or monoclinic or Hexagonal
which part of the answer ?  the first part about definition of alat yes.

"final_alat = input_alat * 0.487685488 / 0.5 = 10,345371472 bohr " where does 0.5 come from

from the comparison of your final cell and the common definition of fcc Bravais lattice.

If i am working on a monoclinic or Hexagonal crystal structure do i still use the 0.5 or how do i calculate the 0.5

  For the atomic position i got
ATOMIC POSITIONS(alat)
si    -0.035697193  -0.035697193  -0.035697193
si    0.208182292  0.208182292    0.208182292
is there a rule to use in converting to
0 0 0 and 1/4 1/4 1/4

read and understand the documentation.
Ask yourself how would you have defined the atomic positions and check in a few cases that you understand the way the code does it. it's just geometry.
Agbaoye Ridwan Olamide
Federal University of Agriculture, Abeokuta
M.Sc. (in view)
On Monday, December 21, 2015 1:18 AM, stefano de gironcoli <[email protected]> wrote:


if nor celldm(1) [in Bohr] nor A [in \AA] are given in input and the CELL_PARAMETERS card is given then alat is defined as the length (in bohr) of the first vector in CELL_PARAMETERS
in your case 7.5*sqrt(2.0)=10.60660172 bohr

if celldm(1) or A are given then the CELL_PARAMETERS are interpreted as given in those units. In input atomic positions are given in the selected units, in output they are always given in unit of the alat value computed/defined in input.

If you want to use AA as your input/output length unit the easiest way is to define

A=1.0 or celldm(1)=1.889726878 in the &system namelist
CELL_PARAMETERS
...
ATOMIC_POSITIONS Angstrom [or alat since they are the same]
...

in output the positions and cell information will be given in (input) alat units, that is in AA again.

HTH

stefano

PS
in your case the silicon cell contracted by
0.487685488 * alat / 7.5 = 0.487685488 * sqrt(2)
the final cell corresponds to an FCC with
final_alat = input_alat * 0.487685488 / 0.5 = 10,345371472 bohr

In these units the atomic coordinates are just
0 0 0 and 1/4 1/4 1/4 (plus a small shift away from the origin due to the fact that the center of mass remains fixed during relaxation)



On 21/12/2015 07:30, Ridwan Agbaoye wrote:
Good Morning Everybody,
I need some help with the interpretation of vc-relax output and conversion from alat to bohr I want to do vc-relax calculation for a monoclinic system but i decide to start with silicon a face-centered cubic system to understand the concept of vc-relax properly
I tried vc-relax for silicon and i got the following output
Begin Final Coordinate
New Unit Cell volume = 276.90769au^3
CELL PARAMETERS(alat=10.60660172)
-0.487685488  -0.000000000  0.487685488
 0.000117363  0.487685488  0.487685488
-0.487685488  0.487685488  -0.000000000
ATOMIC POSITIONS(alat)
si    -0.035697193  -0.035697193  -0.035697193
si    0.208182292  0.208182292    0.208182292
End of Final coordinate
My input file has
ibrav=0    nat=2    ntyp=2
CELL PARAMETER cubic
-7.5000  0.0000  7.5000
0.0000  7.5000   7.5000
-7.5000  7.5000   0.0000
How exactly do we derive our celldm(1) and how do we convert to bohr

Do we need to convert the atomic position from alat to Bohr or Angstrom

must i use bohr as the unit of CELL PARAMETERS or i can use Angstrom and declare it as CELL PARAMETER(angstrom)


Agbaoye Ridwan Olamide
Federal University of Agriculture, Abeokuta
M.Sc.(in view)
[email protected] <mailto:[email protected]>


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