CLASSIFICATION: UNCLASSIFIED Dear Filippo,
> did you make sure to clean everything before move from CUDA 5.5 to CUDA 6.5? >$ make -f Makefile.gpu distclean Didn't work. Same exact error. > What happen if you disable MAGMA? Does it compile? Now that compiled. Can I use this version? How much of a performance hit do I get running without MAGMA? -James ______________________________ Dr. James C. Ianni Applications Engineer Lockheed-Martin / Contractor ARL DoD Supercomputing Resource Center Aberdeen Proving Ground, MD 21005 Email: [email protected] ______________________________ Dr. James C. Ianni Applications Engineer Lockheed-Martin / Contractor ARL DoD Supercomputing Resource Center Aberdeen Proving Ground, MD 21005 ☎Phone: 410-278-7447 Fax : 410-278-8799 Email: [email protected] -----Original Message----- From: [email protected] [mailto:[email protected]] On Behalf Of Filippo SPIGA Sent: Wednesday, February 17, 2016 2:43 PM To: PWSCF Forum <[email protected]> Subject: [Non-DoD Source] Re: [Pw_forum] [QE-GPU] QE-GPU-5.3.0 compilation issues (UNCLASSIFIED) All active links contained in this email were disabled. Please verify the identity of the sender, and confirm the authenticity of all links contained within the message prior to copying and pasting the address to a Web browser. ---- Dear James, did you make sure to clean everything before move from CUDA 5.5 to CUDA 6.5? Meaning: $ make -f Makefile.gpu distclean and re-run the configure from GPU/ folder. What happen if you disable MAGMA? Does it compile? -- Mr. Filippo SPIGA, M.Sc. Quantum ESPRESSO Foundation Caution-http://www.quantum-espresso.org ~ skype: filippo.spiga ***** Disclaimer: "Please note this message and any attachments are CONFIDENTIAL and may be privileged or otherwise protected from disclosure. The contents are not to be disclosed to anyone other than the addressee. Unauthorized recipients are requested to preserve this confidentiality and to advise the sender immediately of any error in transmission." On Feb 17, 2016, at 7:11 PM, Ianni, James C CTR USARMY RDECOM ARL (US) <[email protected]> wrote: > CLASSIFICATION: UNCLASSIFIED > > > Hi, > > I'm trying to compile QE-GPU-5.3.0 on a 64-bit SUSE Linux Sever 11.3 Dell > node. I'm compiling with gcc/4.8.1 with cudatoolkit/6.5.14-1.0502.9613.6.1. I > have successfully compiled QE-GPU-5.3.0 with > cudatoolkit/5.5.22-1.0502.7944.3.1 before, but that version does not run with > the newer cudatoolkit installed. > The compilation problems appears to be missing BLAS libraries (see output > from below) that MAGMA is trying to call. Could it be that the cudatoolkit > wasn't fully installed? > === > > Here is my configure: > > export ARCH x86_64 > export F77="gfortran -fPIC" > export FC="gfortran -fPIC" > export CC="gcc -fPIC" > > ./configure --disable-parallel --enable-openmp \ --enable-cuda > --with-gpu-arch=sm_35 \ > --with-cuda-dir=/opt/cray/nvidia/default/lib64 \ --with-magma > --with-phigemm > --prefix=/usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0 > > ======== > <..SNIP..> > .. > gfortran -fPIC -g -fopenmp -o pw-gpu.x \ > pwscf.o ../../PW/src/libpw.a libpwgpu.a ../../Modules/libqemod.a > ../../FFTXlib/libqefft.a ../Modules/libqemodgpu.a ../../flib/ptools.a > ../../flib/flib.a ../../clib/clib.a ../../iotk/src/libiotk.a > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//qe-magma/lib/libmagma.a > > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//lapack-3.2/lapack.a > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//phiGEMM/lib/libphigemm.a > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//BLAS/blas.a > -L/opt/nvidia/cudatoolkit6.5/6.5.14-1.0502.9613.6.1/lib64 -lcublas -lcufft > -lcudart > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//qe-magma/lib/libmagma.a(zgeqp3.o): > In function `magma_zgeqp3': > zgeqp3.cpp:(.text+0x33f): undefined reference to `cblas_dznrm2' > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//qe-magma/lib/libmagma.a(zlaqps.o): > In function `magma_zlaqps': > zlaqps.cpp:(.text+0x207): undefined reference to `cblas_idamax' > zlaqps.cpp:(.text+0x97c): undefined reference to `cblas_dznrm2' > zlaqps.cpp:(.text+0xa15): undefined reference to `cblas_dznrm2' > .. > <..SNIP..> > ______________________________ > Dr. James C. Ianni > Applications Engineer > Lockheed-Martin / Contractor > ARL DoD Supercomputing Resource Center Aberdeen Proving Ground, MD > 21005 > Email: [email protected] > > > > CLASSIFICATION: UNCLASSIFIED > _______________________________________________ > Pw_forum mailing list > [email protected] > Caution-http://pwscf.org/mailman/listinfo/pw_forum _______________________________________________ Pw_forum mailing list [email protected] Caution-http://pwscf.org/mailman/listinfo/pw_forum CLASSIFICATION: UNCLASSIFIED _______________________________________________ Pw_forum mailing list [email protected] http://pwscf.org/mailman/listinfo/pw_forum
