Dear QE users and developers, Few days ago, my notebook is crashed and I have to reinstall my system (Lubuntu-16.04) and QE-6.0.0.
Whenever I tried to install QE with external FFTW library (-D__FFTW3), I always get this message while running pw.x: Program received signal SIGSEGV: Segmentation fault - invalid memory reference. Backtrace for this error: #0 0xB74E2C66 #1 0xB74E1D0E #2 0xB7F5ECEF #3 0xB776E9B8 #4 0xB7632104 #5 0xB76310DA #6 0xB76310A2 #7 0xB7635A43 #8 0xB76355F2 #9 0xB7635A43 #10 0xB7629DFA #11 0x8360DFB in __fft_scalar_MOD_cft_2xy at fft_scalar.FFTW3.f90:288 #12 0x8364589 in __fft_parallel_MOD_tg_cft3s at fft_parallel.f90:151 (discriminator 2) #13 0x83650F2 in invfft_x_ at fft_interfaces.f90:137 (discriminator 2) #14 0x81290DD in atomic_rho_ at atomic_rho.f90:150 #15 0x80CEF5B in potinit_ at potinit.f90:129 #16 0x8099893 in init_run_ at init_run.f90:111 #17 0x80DE9B7 in run_pwscf_ at run_pwscf.f90:80 #18 0x804EBC7 in MAIN__ at pwscf.f90:36 But, whenever I run pw.x with internal FFTW library (-D_FFTW) it always succeeded. So, how could I get pw.x run correctly with external FFTW library? Regards, Erland Rachmad Student at Engineering Physics Undergraduate Program Insttitut Teknologi Bandung, Bandung, Indonesia
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by ESPRESSO configure 6.0-beta, which was
generated by GNU Autoconf 2.63. Invocation command line was
$ ./install/configure --prefix=/home/erland FC=gfortran FCFLAGS=-O3 CC=gcc CFLAGS=-O3 MPIF90=mpif90 LIBDIRS=/usr/local/lib
## --------- ##
## Platform. ##
## --------- ##
hostname = erland-Lenovo-B490
uname -m = i686
uname -r = 4.13.0-41-generic
uname -s = Linux
uname -v = #46~16.04.1-Ubuntu SMP Thu May 3 10:06:03 UTC 2018
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /home/erland/Documents/XCrySDen-1.5.24-bin-semishared
PATH: /usr/local/mpich/bin
PATH: /home/erland/bin
PATH: /home/erland/.local/bin
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/games
PATH: /usr/local/games
PATH: /usr/local/mpich/bin
PATH: /usr/local/bin
PATH: /home/erland/bin
PATH: /usr/local/lib
PATH: /usr/local/mpich/bin
PATH: /home/erland/bin
PATH: /home/erland/.local/bin
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/games
PATH: /usr/local/games
PATH: /usr/local/mpich/bin
PATH: /usr/local/bin
PATH: /home/erland/bin
PATH: /home/erland/bin
PATH: /usr/local/mpich/bin
PATH: /home/erland/bin
PATH: /home/erland/.local/bin
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/games
PATH: /usr/local/games
PATH: /usr/local/mpich/bin
PATH: /usr/local/bin
PATH: /home/erland/bin
PATH: /usr/local/lib
PATH: /usr/local/mpich/bin
PATH: /home/erland/bin
PATH: /home/erland/.local/bin
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/games
PATH: /usr/local/games
PATH: /usr/local/mpich/bin
PATH: /usr/local/bin
PATH: /home/erland/bin
PATH: /home/erland/Documents/XCrySDen-1.5.24-bin-semishared/scripts
PATH: /home/erland/Documents/XCrySDen-1.5.24-bin-semishared/util
## ----------- ##
## Core tests. ##
## ----------- ##
configure:1985: checking build system type
configure:2003: result: i686-pc-linux-gnu
configure:2029: checking ARCH
configure:2077: result: ia32
configure:2099: checking setting AR...
configure:2105: result: ar
configure:2109: checking setting ARFLAGS...
configure:2124: result: ruv
configure:2363: checking for Fortran compiler version
configure:2371: gfortran --version >&5
GNU Fortran (Ubuntu 5.4.0-6ubuntu1~16.04.9) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:2375: $? = 0
configure:2382: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/5/lto-wrapper
Target: i686-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.9' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-i386/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-i386 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-i386 --with-arch-directory=i386 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.9)
configure:2386: $? = 0
configure:2393: gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:2397: $? = 1
configure:2411: checking for Fortran compiler default output file name
configure:2433: gfortran -O3 conftest.f >&5
configure:2437: $? = 0
configure:2475: result: a.out
configure:2494: checking whether the Fortran compiler works
configure:2504: ./a.out
configure:2508: $? = 0
configure:2527: result: yes
configure:2534: checking whether we are cross compiling
configure:2536: result: no
configure:2539: checking for suffix of executables
configure:2546: gfortran -o conftest -O3 conftest.f >&5
configure:2550: $? = 0
configure:2576: result:
configure:2582: checking for suffix of object files
configure:2598: gfortran -c -O3 conftest.f >&5
configure:2602: $? = 0
configure:2627: result: o
configure:2635: checking whether we are using the GNU Fortran compiler
configure:2654: gfortran -c -O3 conftest.F >&5
configure:2661: $? = 0
configure:2678: result: yes
configure:2684: checking whether gfortran accepts -g
configure:2701: gfortran -c -g conftest.f >&5
configure:2708: $? = 0
configure:2724: result: yes
configure:2753: checking for Fortran flag to compile .f90 files
configure:2775: gfortran -c -O3 conftest.f90 >&5
configure:2782: $? = 0
configure:2801: result: none
configure:3150: checking for mpif90
configure:3166: found /usr/local/mpich/bin/mpif90
configure:3177: result: mpif90
configure:3203: checking for Fortran compiler version
configure:3211: mpif90 --version >&5
GNU Fortran (Ubuntu 5.4.0-6ubuntu1~16.04.9) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:3215: $? = 0
configure:3222: mpif90 -v >&5
mpifort for MPICH version 3.2.1
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/5/lto-wrapper
Target: i686-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.9' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-i386/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-i386 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-i386 --with-arch-directory=i386 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.9)
configure:3226: $? = 0
configure:3233: mpif90 -V >&5
gfortran: error: unrecognized command line option '-V'
configure:3237: $? = 1
configure:3245: checking whether we are using the GNU Fortran compiler
configure:3264: mpif90 -c -O3 conftest.F >&5
configure:3271: $? = 0
configure:3288: result: yes
configure:3294: checking whether mpif90 accepts -g
configure:3311: mpif90 -c -g conftest.f90 >&5
configure:3318: $? = 0
configure:3334: result: yes
configure:3691: checking for C compiler version
configure:3699: gcc --version >&5
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.9) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:3703: $? = 0
configure:3710: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/5/lto-wrapper
Target: i686-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.9' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-i386/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-i386 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-i386 --with-arch-directory=i386 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.9)
configure:3714: $? = 0
configure:3721: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:3725: $? = 1
configure:3728: checking whether we are using the GNU C compiler
configure:3757: gcc -c -O3 conftest.c >&5
configure:3764: $? = 0
configure:3781: result: yes
configure:3790: checking whether gcc accepts -g
configure:3820: gcc -c -g conftest.c >&5
configure:3827: $? = 0
configure:3928: result: yes
configure:3945: checking for gcc option to accept ISO C89
configure:4019: gcc -c -O3 conftest.c >&5
configure:4026: $? = 0
configure:4049: result: none needed
configure:4138: checking how to run the C preprocessor
configure:4178: gcc -E conftest.c
configure:4185: $? = 0
configure:4216: gcc -E conftest.c
conftest.c:8:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:4223: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPRESSO"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "6.0-beta"
| #define PACKAGE_STRING "ESPRESSO 6.0-beta"
| #define PACKAGE_BUGREPORT ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:4256: result: gcc -E
configure:4285: gcc -E conftest.c
configure:4292: $? = 0
configure:4323: gcc -E conftest.c
conftest.c:8:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:4330: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPRESSO"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "6.0-beta"
| #define PACKAGE_STRING "ESPRESSO 6.0-beta"
| #define PACKAGE_BUGREPORT ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:4370: checking for grep that handles long lines and -e
configure:4430: result: /bin/grep
configure:4435: checking for egrep
configure:4499: result: /bin/grep -E
configure:4504: checking for ANSI C header files
configure:4534: gcc -c -O3 conftest.c >&5
configure:4541: $? = 0
configure:4640: gcc -o conftest -O3 conftest.c >&5
configure:4644: $? = 0
configure:4650: ./conftest
configure:4654: $? = 0
configure:4672: result: yes
configure:4696: checking for sys/types.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4696: checking for sys/stat.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4696: checking for stdlib.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4696: checking for string.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4696: checking for memory.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4696: checking for strings.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4696: checking for inttypes.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4696: checking for stdint.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4696: checking for unistd.h
configure:4717: gcc -c -O3 conftest.c >&5
configure:4724: $? = 0
configure:4741: result: yes
configure:4764: checking size of int *
configure:5069: gcc -o conftest -O3 conftest.c >&5
configure:5073: $? = 0
configure:5079: ./conftest
configure:5083: $? = 0
configure:5109: result: 4
configure:5133: checking malloc.h usability
configure:5150: gcc -c -O3 conftest.c >&5
configure:5157: $? = 0
configure:5171: result: yes
configure:5175: checking malloc.h presence
configure:5190: gcc -E conftest.c
configure:5197: $? = 0
configure:5211: result: yes
configure:5239: checking for malloc.h
configure:5246: result: yes
configure:5259: checking for struct mallinfo.arena
configure:5288: gcc -c -O3 conftest.c >&5
configure:5295: $? = 0
configure:5354: result: yes
configure:5453: checking for gfortran
configure:5469: found /usr/bin/gfortran
configure:5480: result: gfortran
configure:5506: checking for Fortran 77 compiler version
configure:5514: gfortran --version >&5
GNU Fortran (Ubuntu 5.4.0-6ubuntu1~16.04.9) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:5518: $? = 0
configure:5525: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/5/lto-wrapper
Target: i686-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.9' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-i386/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-i386 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-i386 --with-arch-directory=i386 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.9)
configure:5529: $? = 0
configure:5536: gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:5540: $? = 1
configure:5548: checking whether we are using the GNU Fortran 77 compiler
configure:5567: gfortran -c conftest.F >&5
configure:5574: $? = 0
configure:5591: result: yes
configure:5597: checking whether gfortran accepts -g
configure:5614: gfortran -c -g conftest.f >&5
configure:5621: $? = 0
configure:5637: result: yes
configure:6049: checking whether make sets $(MAKE)
configure:6071: result: yes
configure:6101: checking how to get verbose linking output from gfortran
configure:6117: gfortran -c -g -O2 conftest.f >&5
configure:6124: $? = 0
configure:6146: gfortran -o conftest -g -O2 -v conftest.f
Using built-in specs.
Target: i686-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.9' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-i386/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-i386 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-i386 --with-arch-directory=i386 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.9)
/usr/lib/gcc/i686-linux-gnu/5/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=i686 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/i686-linux-gnu/5/finclude -o /tmp/ccYgnchB.s
GNU Fortran (Ubuntu 5.4.0-6ubuntu1~16.04.9) version 5.4.0 20160609 (i686-linux-gnu)
compiled by GNU C version 5.4.0 20160609, GMP version 6.1.0, MPFR version 3.1.4, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran2008 (Ubuntu 5.4.0-6ubuntu1~16.04.9) version 5.4.0 20160609 (i686-linux-gnu)
compiled by GNU C version 5.4.0 20160609, GMP version 6.1.0, MPFR version 3.1.4, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
as -v --32 -o /tmp/cck3O3J0.o /tmp/ccYgnchB.s
GNU assembler version 2.26.1 (i686-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.26.1
Reading specs from /usr/lib/gcc/i686-linux-gnu/5/libgfortran.spec
rename spec lib to liborig
/usr/lib/gcc/i686-linux-gnu/5/collect2 -plugin /usr/lib/gcc/i686-linux-gnu/5/liblto_plugin.so -plugin-opt=/usr/lib/gcc/i686-linux-gnu/5/lto-wrapper -plugin-opt=-fresolution=/tmp/ccloE2dq.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -m elf_i386 --hash-style=gnu --as-needed -dynamic-linker /lib/ld-linux.so.2 -z relro -o conftest /usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu/crt1.o /usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/5/crtbegin.o -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. /tmp/cck3O3J0.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/i686-linux-gnu/5/crtend.o /usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu/crtn.o
configure:6215: result: -v
configure:6217: checking for Fortran 77 libraries of gfortran
configure:6240: gfortran -o conftest -g -O2 -v conftest.f
Using built-in specs.
Target: i686-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.9' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-i386/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-i386 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-i386 --with-arch-directory=i386 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.9)
/usr/lib/gcc/i686-linux-gnu/5/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=i686 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/i686-linux-gnu/5/finclude -o /tmp/ccWkjjHG.s
GNU Fortran (Ubuntu 5.4.0-6ubuntu1~16.04.9) version 5.4.0 20160609 (i686-linux-gnu)
compiled by GNU C version 5.4.0 20160609, GMP version 6.1.0, MPFR version 3.1.4, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran2008 (Ubuntu 5.4.0-6ubuntu1~16.04.9) version 5.4.0 20160609 (i686-linux-gnu)
compiled by GNU C version 5.4.0 20160609, GMP version 6.1.0, MPFR version 3.1.4, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
as -v --32 -o /tmp/ccQfQ7l6.o /tmp/ccWkjjHG.s
GNU assembler version 2.26.1 (i686-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.26.1
Reading specs from /usr/lib/gcc/i686-linux-gnu/5/libgfortran.spec
rename spec lib to liborig
/usr/lib/gcc/i686-linux-gnu/5/collect2 -plugin /usr/lib/gcc/i686-linux-gnu/5/liblto_plugin.so -plugin-opt=/usr/lib/gcc/i686-linux-gnu/5/lto-wrapper -plugin-opt=-fresolution=/tmp/cchUNJ1v.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -m elf_i386 --hash-style=gnu --as-needed -dynamic-linker /lib/ld-linux.so.2 -z relro -o conftest /usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu/crt1.o /usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/5/crtbegin.o -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. /tmp/ccQfQ7l6.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/i686-linux-gnu/5/crtend.o /usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu/crtn.o
configure:6417: result: -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. -lgfortran -lm -lquadmath
configure:6433: checking for dummy main to link with Fortran 77 libraries
configure:6477: gcc -o conftest -O3 conftest.c -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5
configure:6484: $? = 0
configure:6572: result: none
configure:6611: checking for Fortran 77 name-mangling scheme
configure:6630: gfortran -c -g -O2 conftest.f >&5
configure:6637: $? = 0
configure:6692: gcc -o conftest -O3 conftest.c cfortran_test.o -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5
/tmp/ccpTpePd.o: In function `main':
conftest.c:(.text.startup+0x12): undefined reference to `foobar'
collect2: error: ld returned 1 exit status
configure:6699: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPRESSO"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "6.0-beta"
| #define PACKAGE_STRING "ESPRESSO 6.0-beta"
| #define PACKAGE_BUGREPORT ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define SIZEOF_INT_P 4
| #define HAVE_MALLINFO 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char foobar ();
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| return foobar ();
| ;
| return 0;
| }
configure:6692: gcc -o conftest -O3 conftest.c cfortran_test.o -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5
configure:6699: $? = 0
configure:6781: gcc -o conftest -O3 conftest.c cfortran_test.o -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5
configure:6788: $? = 0
configure:6851: result: lower case, underscore, no extra underscore
configure:8323: checking for library containing dgemm
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L conftest.f >&5
gfortran: fatal error: no input files; unwilling to write output files
compilation terminated.
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L conftest.f -lmkl_gf -lmkl_sequential -lmkl_core >&5
/usr/bin/ld: cannot find -lmkl_gf
/usr/bin/ld: cannot find -lmkl_sequential
/usr/bin/ld: cannot find -lmkl_core
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8385: result: no
configure:8323: checking for library containing dgemm
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/lib conftest.f >&5
/tmp/cc7mET9Y.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dgemm_'
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/lib conftest.f -lmkl_gf -lmkl_sequential -lmkl_core >&5
/usr/bin/ld: cannot find -lmkl_gf
/usr/bin/ld: cannot find -lmkl_sequential
/usr/bin/ld: cannot find -lmkl_core
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8385: result: no
configure:8323: checking for library containing dgemm
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/composer*/mkl/lib/ia32 conftest.f >&5
/tmp/ccMXga97.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dgemm_'
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/composer*/mkl/lib/ia32 conftest.f -lmkl_gf -lmkl_sequential -lmkl_core >&5
/usr/bin/ld: cannot find -lmkl_gf
/usr/bin/ld: cannot find -lmkl_sequential
/usr/bin/ld: cannot find -lmkl_core
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8385: result: no
configure:8323: checking for library containing dgemm
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/Compiler/*/*/mkl/lib/32 conftest.f >&5
/tmp/ccLLoigi.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dgemm_'
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/Compiler/*/*/mkl/lib/32 conftest.f -lmkl_gf -lmkl_sequential -lmkl_core >&5
/usr/bin/ld: cannot find -lmkl_gf
/usr/bin/ld: cannot find -lmkl_sequential
/usr/bin/ld: cannot find -lmkl_core
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8385: result: no
configure:8323: checking for library containing dgemm
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/mkl/*/lib/32 conftest.f >&5
/tmp/ccmRiaDs.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dgemm_'
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/mkl/*/lib/32 conftest.f -lmkl_gf -lmkl_sequential -lmkl_core >&5
/usr/bin/ld: cannot find -lmkl_gf
/usr/bin/ld: cannot find -lmkl_sequential
/usr/bin/ld: cannot find -lmkl_core
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8385: result: no
configure:8323: checking for library containing dgemm
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/mkl*/lib/32 conftest.f >&5
/tmp/cc1KPCSD.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dgemm_'
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/mkl*/lib/32 conftest.f -lmkl_gf -lmkl_sequential -lmkl_core >&5
/usr/bin/ld: cannot find -lmkl_gf
/usr/bin/ld: cannot find -lmkl_sequential
/usr/bin/ld: cannot find -lmkl_core
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8385: result: no
configure:8323: checking for library containing dgemm
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/mkl/lib conftest.f >&5
/tmp/ccCC794E.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dgemm_'
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/opt/intel/mkl/lib conftest.f -lmkl_gf -lmkl_sequential -lmkl_core >&5
/usr/bin/ld: cannot find -lmkl_gf
/usr/bin/ld: cannot find -lmkl_sequential
/usr/bin/ld: cannot find -lmkl_core
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8385: result: no
configure:8323: checking for library containing dgemm
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/mpich/lib conftest.f >&5
/tmp/ccIJZs9P.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dgemm_'
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8347: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/mpich/lib conftest.f -lmkl_gf -lmkl_sequential -lmkl_core >&5
/usr/bin/ld: cannot find -lmkl_gf
/usr/bin/ld: cannot find -lmkl_sequential
/usr/bin/ld: cannot find -lmkl_core
collect2: error: ld returned 1 exit status
configure:8354: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:8385: result: no
configure:9303: checking for library containing dgemm
configure:9327: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -latlas >&5
/usr/bin/ld: cannot find -latlas
collect2: error: ld returned 1 exit status
configure:9334: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9327: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -lf77blas -lg2c -latlas >&5
/usr/bin/ld: cannot find -lf77blas
/usr/bin/ld: cannot find -lg2c
/usr/bin/ld: cannot find -latlas
collect2: error: ld returned 1 exit status
configure:9334: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9365: result: no
configure:9303: checking for library containing dgemm
configure:9327: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/lib conftest.f -latlas >&5
/usr/bin/ld: cannot find -latlas
collect2: error: ld returned 1 exit status
configure:9334: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9327: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/lib conftest.f -lf77blas -lg2c -latlas >&5
/usr/bin/ld: cannot find -lf77blas
/usr/bin/ld: cannot find -lg2c
/usr/bin/ld: cannot find -latlas
collect2: error: ld returned 1 exit status
configure:9334: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9365: result: no
configure:9303: checking for library containing dgemm
configure:9327: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/lib conftest.f -latlas >&5
/usr/bin/ld: cannot find -latlas
collect2: error: ld returned 1 exit status
configure:9334: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9327: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/lib conftest.f -lf77blas -lg2c -latlas >&5
/usr/bin/ld: cannot find -lf77blas
/usr/bin/ld: cannot find -lg2c
/usr/bin/ld: cannot find -latlas
collect2: error: ld returned 1 exit status
configure:9334: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9365: result: no
configure:9303: checking for library containing dgemm
configure:9327: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/mpich/lib conftest.f -latlas >&5
/usr/bin/ld: cannot find -latlas
collect2: error: ld returned 1 exit status
configure:9334: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9327: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread -L/usr/local/mpich/lib conftest.f -lf77blas -lg2c -latlas >&5
/usr/bin/ld: cannot find -lf77blas
/usr/bin/ld: cannot find -lg2c
/usr/bin/ld: cannot find -latlas
collect2: error: ld returned 1 exit status
configure:9334: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9365: result: no
configure:9400: checking for library containing dgemm
configure:9424: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f >&5
/tmp/ccarfsaD.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dgemm_'
collect2: error: ld returned 1 exit status
configure:9431: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9424: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -lblas-3 >&5
/usr/bin/ld: cannot find -lblas-3
collect2: error: ld returned 1 exit status
configure:9431: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9424: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -lopenblas >&5
/usr/bin/ld: cannot find -lopenblas
collect2: error: ld returned 1 exit status
configure:9431: $? = 1
configure: failed program was:
| program main
| call dgemm
| end
configure:9424: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -lblas >&5
configure:9431: $? = 0
configure:9462: result: -lblas
configure:9945: checking for library containing dspev
configure:9969: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -lblas >&5
/tmp/ccFUETWP.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dspev_'
collect2: error: ld returned 1 exit status
configure:9976: $? = 1
configure: failed program was:
| program main
| call dspev
| end
configure:9969: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -llapack-3 -lblas >&5
/usr/bin/ld: cannot find -llapack-3
collect2: error: ld returned 1 exit status
configure:9976: $? = 1
configure: failed program was:
| program main
| call dspev
| end
configure:9969: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -llapack -lblas >&5
configure:9976: $? = 0
configure:10007: result: -llapack
configure:10065: checking FFT
configure:10632: checking for DftiComputeForward in -lmkl_intel_lp64
configure:10675: gcc -o conftest -O3 -O3 -g -pthread conftest.c -lmkl_intel_lp64 -lblas -lm >&5
/usr/bin/ld: cannot find -lmkl_intel_lp64
collect2: error: ld returned 1 exit status
configure:10682: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPRESSO"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "6.0-beta"
| #define PACKAGE_STRING "ESPRESSO 6.0-beta"
| #define PACKAGE_BUGREPORT ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define SIZEOF_INT_P 4
| #define HAVE_MALLINFO 1
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char DftiComputeForward ();
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| return DftiComputeForward ();
| ;
| return 0;
| }
configure:10703: result: no
configure:11008: checking for library containing dfftw_execute_dft
configure:11032: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f >&5
/tmp/cc4Zsl1d.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `dfftw_execute_dft_'
collect2: error: ld returned 1 exit status
configure:11039: $? = 1
configure: failed program was:
| program main
| call dfftw_execute_dft
| end
configure:11032: gfortran -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -lfftw3 -lm >&5
configure:11039: $? = 0
configure:11070: result: -lfftw3
configure:11137: result: -lfftw3
configure:11165: checking MASS
configure:11483: result:
configure:11514: checking for library containing mpi_init
configure:11538: mpif90 -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f >&5
configure:11545: $? = 0
configure:11576: result: none required
configure:11650: checking for library containing pdgemr2d
configure:11674: mpif90 -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f >&5
/tmp/cchX0OoB.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `pdgemr2d_'
collect2: error: ld returned 1 exit status
configure:11681: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:11674: mpif90 -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f >&5
/tmp/cc6vHThJ.o: In function `MAIN__':
/home/erland/Documents/q-e-qe-6.0.0/conftest.f:2: undefined reference to `pdgemr2d_'
collect2: error: ld returned 1 exit status
configure:11681: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:11712: result: no
configure:11811: checking for library containing pdgemr2d
configure:11835: mpif90 -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -lsci >&5
/usr/bin/ld: cannot find -lsci
collect2: error: ld returned 1 exit status
configure:11842: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:11835: mpif90 -o conftest -O3 -g -x f95-cpp-input -g -pthread conftest.f -lsci >&5
/usr/bin/ld: cannot find -lsci
collect2: error: ld returned 1 exit status
configure:11842: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:11873: result: no
configure:11888: checking for library containing pdgemr2d
configure:11912: mpif90 -o conftest -O3 -g -x f95-cpp-input conftest.f -lscalapack >&5
/usr/bin/ld: cannot find -lscalapack
collect2: error: ld returned 1 exit status
configure:11919: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:11912: mpif90 -o conftest -O3 -g -x f95-cpp-input conftest.f -lscalapack >&5
/usr/bin/ld: cannot find -lscalapack
collect2: error: ld returned 1 exit status
configure:11919: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:11950: result: no
configure:11966: checking for library containing pdgemr2d
configure:11990: mpif90 -o conftest -O3 -g -x f95-cpp-input conftest.f -lscalapack -lblacs -lblacsF77init -lblacs >&5
/usr/bin/ld: cannot find -lscalapack
/usr/bin/ld: cannot find -lblacs
/usr/bin/ld: cannot find -lblacsF77init
/usr/bin/ld: cannot find -lblacs
collect2: error: ld returned 1 exit status
configure:11997: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:11990: mpif90 -o conftest -O3 -g -x f95-cpp-input conftest.f -lscalapack -lblacs -lblacsF77init -lblacs >&5
/usr/bin/ld: cannot find -lscalapack
/usr/bin/ld: cannot find -lblacs
/usr/bin/ld: cannot find -lblacsF77init
/usr/bin/ld: cannot find -lblacs
collect2: error: ld returned 1 exit status
configure:11997: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:12028: result: no
configure:12046: checking for library containing pdgemr2d
configure:12070: mpif90 -o conftest -O3 -g -x f95-cpp-input conftest.f -L/bgsys/local/scalapack/lib -lscalapack -L/bgsys/local/blacs/lib -lblacs -lblacsF77init -lblacs >&5
/usr/bin/ld: cannot find -lscalapack
/usr/bin/ld: cannot find -lblacs
/usr/bin/ld: cannot find -lblacsF77init
/usr/bin/ld: cannot find -lblacs
collect2: error: ld returned 1 exit status
configure:12077: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:12070: mpif90 -o conftest -O3 -g -x f95-cpp-input conftest.f -L/bgsys/local/scalapack/lib -lscalapack -L/bgsys/local/blacs/lib -lblacs -lblacsF77init -lblacs >&5
/usr/bin/ld: cannot find -lscalapack
/usr/bin/ld: cannot find -lblacs
/usr/bin/ld: cannot find -lblacsF77init
/usr/bin/ld: cannot find -lblacs
collect2: error: ld returned 1 exit status
configure:12077: $? = 1
configure: failed program was:
| program main
| call pdgemr2d
| end
configure:12108: result: no
configure:12141: checking ELPA
configure:12190: result:
configure:12478: checking for ranlib
configure:12494: found /usr/bin/ranlib
configure:12506: result: ranlib
configure:12532: checking for wget
configure:12548: found /usr/bin/wget
configure:12559: result: wget -O
configure:12761: creating ./config.status
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by ESPRESSO config.status 6.0-beta, which was
generated by GNU Autoconf 2.63. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status
on erland-Lenovo-B490
config.status:795: creating install/make_lapack.inc
config.status:795: creating include/fft_defs.h
config.status:795: creating include/configure.h
config.status:795: creating make.inc
config.status:795: creating configure.msg
config.status:795: creating install/make_wannier90.inc
config.status:795: creating include/c_defs.h
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=i686-pc-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_env_CC_set=set
ac_cv_env_CC_value=gcc
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value=-O3
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_EXTLIB_FLAGS_set=
ac_cv_env_EXTLIB_FLAGS_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FCFLAGS_set=set
ac_cv_env_FCFLAGS_value=-O3
ac_cv_env_FC_set=set
ac_cv_env_FC_value=gfortran
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_f77_dummy_main=none
ac_cv_f77_libs=' -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. -lgfortran -lm -lquadmath'
ac_cv_f77_mangling='lower case, underscore, no extra underscore'
ac_cv_fc_compiler_gnu=yes
ac_cv_fc_srcext_f90=none
ac_cv_fortran_dummy_main=none
ac_cv_header_inttypes_h=yes
ac_cv_header_malloc_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_lib_mkl_intel_lp64_DftiComputeForward=no
ac_cv_member_struct_mallinfo_arena=yes
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_GREP=/bin/grep
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_ac_ct_F77=gfortran
ac_cv_prog_ac_ct_FC=mpif90
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_f77_g=yes
ac_cv_prog_f77_v=-v
ac_cv_prog_fc_g=yes
ac_cv_prog_make_make_set=yes
ac_cv_prog_ranlib=ranlib
ac_cv_prog_wget='wget -O'
ac_cv_search_dfftw_execute_dft=-lfftw3
ac_cv_search_dgemm=-lblas
ac_cv_search_dspev=-llapack
ac_cv_search_mpi_init='none required'
ac_cv_search_pdgemr2d=no
ac_cv_sizeof_int_p=4
## ----------------- ##
## Output variables. ##
## ----------------- ##
CC='gcc'
CFLAGS='-O3'
CPP='gcc -E'
CPPFLAGS='-O3'
Configured for compilation of parallel executables.'
DEFS='-DHAVE_CONFIG_H'
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
EXEEXT=''
EXTLIB_FLAGS=''
F77='mpif90'
FC='mpif90'
FCFLAGS='-O3'
FCFLAGS_f90=''
FFLAGS='-O3 -g -x f95-cpp-input'
FLIBS=' -L/usr/lib/gcc/i686-linux-gnu/5 -L/usr/lib/gcc/i686-linux-gnu/5/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/5/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/5/../../.. -lgfortran -lm -lquadmath'
GREP='/bin/grep'
LDFLAGS=''
LIBOBJS=''
LIBS=' -L/bgsys/local/scalapack/lib -lscalapack -L/bgsys/local/blacs/lib -lblacs -lblacsF77init -lblacs'
LTLIBOBJS=''
OBJEXT='o'
PACKAGE_BUGREPORT=''
PACKAGE_NAME='ESPRESSO'
PACKAGE_STRING='ESPRESSO 6.0-beta'
PACKAGE_TARNAME='espresso'
PACKAGE_VERSION='6.0-beta'
PATH_SEPARATOR=':'
SET_MAKE=''
SHELL='/bin/bash'
SIZEOF_INT_P='4'
ac_ct_CC=''
ac_ct_F77='gfortran'
ac_ct_FC='mpif90'
ar='ar'
arch='ia32'
arflags='ruv'
bindir='${exec_prefix}/bin'
blas_libs=' -lblas '
blas_libs_switch='external'
blas_line='BLAS_LIBS= -lblas '
build='i686-pc-linux-gnu'
build_alias=''
build_cpu='i686'
build_os='linux-gnu'
build_vendor='pc'
cc='gcc'
cflags='-O3'
cpp='cpp'
cppflags='-P -traditional'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
dflags=' -D__GFORTRAN -D__STD_F95 -D__FFTW3 -D__MPI'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
elpa_libs=''
elpa_line='@delete@'
exec_prefix='${prefix}'
extlib_flags=''
f77='gfortran'
f90='gfortran'
f90flags='$(FFLAGS) -x f95-cpp-input'
f90rule='$(MPIF90) $(F90FLAGS) -c $<'
fdflags='$(DFLAGS) $(MANUAL_DFLAGS)'
fflags='-O3 -g'
fflags_nomain=''
fflags_noopt='-O0 -g'
fft_libs=' -lfftw3 '
fft_line='FFT_LIBS= -lfftw3 '
hdf5_libs=''
hdf5_line=''
host_alias=''
htmldir='${docdir}'
iflags='-I$(TOPDIR)/include -I../include/'
imod='-I'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
lapack_libs=' -llapack -lblas '
lapack_libs_switch='external'
lapack_line='LAPACK_LIBS= -llapack -lblas '
ld='mpif90'
ld_libs=''
ldflags='-g -pthread'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mass_libs=''
mass_line='@delete@'
mpi_libs=''
mpi_line='@delete@'
mpif90='mpif90'
oldincludedir='/usr/include'
parallel_report='Parallel environment detected successfully.\
pdfdir='${docdir}'
pre_fdflags=''
prefix='/home/erland'
program_transform_name='s,x,x,'
psdir='${docdir}'
ranlib='ranlib'
sbindir='${exec_prefix}/sbin'
scalapack_libs=''
scalapack_line='@delete@'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
topdir='/home/erland/Documents/q-e-qe-6.0.0'
wget='wget -O'
## ----------- ##
## confdefs.h. ##
## ----------- ##
#define PACKAGE_NAME "ESPRESSO"
#define PACKAGE_TARNAME "espresso"
#define PACKAGE_VERSION "6.0-beta"
#define PACKAGE_STRING "ESPRESSO 6.0-beta"
#define PACKAGE_BUGREPORT ""
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define SIZEOF_INT_P 4
#define HAVE_MALLINFO 1
#define F77_FUNC(name,NAME) name ## _
#define F77_FUNC_(name,NAME) name ## _
configure: exit 0
make.inc
Description: Binary data
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