1. When I do phonon calculation of isolated CO molecule with q points sampling automatically 2x2x2, I find large negative frequency emerges in DOS.

Hello Yike,
if it is an isolated molecule, only the phonons at Gamma make sense : there is no point in doing a 2x2x2 grid. If the negative frequencies are not at Gamma, there is nothing to worry about.

cheers

--
Lorenzo Paulatto - Paris
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