Hi,
After doing a vc-relax calculation, I used the relaxed cell parameters and
coordinates to run a scf calculation with the same convergence criteria and
cutoffs. However, the system's stress and pressure are shown to be very
different. A similar issue I encountered on the QE forum, was fixed by
tweaking the convergence against the Ecut value. But before I even started
the computations, I verified convergence against Ecut and Kpoints.  I have
used the NC PseudoDojo PP. Any assistance in this respect would be greatly
appreciated.

*Here is the output stress from the last step of vc-relax:*
          total   stress  (Ry/bohr**3)                   (kbar)     P=
   0.01
   0.00000007  -0.00000001   0.00000000            0.01       -0.00
 0.00
  -0.00000001   0.00000007  -0.00000001           -0.00        0.01
-0.00
   0.00000000  -0.00000001   0.00000008            0.00       -0.00
 0.01

*Here is the output stress from scf:*
         total   stress  (Ry/bohr**3)                   (kbar)     P=
-0.81
   0.00000173   0.00001357  -0.00001496            0.26        2.00
-2.20
   0.00001357   0.00000039   0.00000247            2.00        0.06
 0.36
  -0.00001496   0.00000247  -0.00001869           -2.20        0.36
-2.75

*vc-relax input:*
&CONTROL
  calculation = 'vc-relax'
  etot_conv_thr =   1.0000000000d-06
  forc_conv_thr =   1.0000000000d-05
  outdir = './out/'
  restart_mode = "restart"
  pseudo_dir =
'/home/ikharagpur/Desktop/Aritri/HAP_QE_NEW_FINAL/HAP/convergance/ecut'
  tprnfor = .true.
  tstress = .true.
  verbosity = 'high'
  nstep = 200
/
&SYSTEM
  degauss =   7.3498618000d-03
  ecutrho =   6.40000000000d+02
  ecutwfc =   7.00000000000d+01
  ibrav = 0
  nat = 41
  nosym = .false.
  ntyp = 6
  occupations = 'smearing'
  smearing = 'cold'
/
&ELECTRONS
  conv_thr =   1.000000000d-06
  electron_maxstep = 200
  mixing_beta =   4.0000000000d-01
/

&IONS
    ion_dynamics = "bfgs"
/

&CELL
press_conv_thr = 2.0000000000d-01
/
ATOMIC_SPECIES
Ca     40.078 Ca.upf
Na     22.98977  Na.upf
C      12.01070  C.upf
O      15.99940  O.upf
P      30.973761 P.upf
F      18.99840  F.upf
ATOMIC_POSITIONS (angstrom)
Ca            4.9287293961        2.5312304672       -0.0636442378
Ca            4.9349185508        2.9027082111        3.5370417241
Ca           -0.1577580449        5.2894025247        3.4702936429
Ca           -0.0739768540        5.6370186571        6.8292427360
Ca            8.2864929497        1.8261397245        1.8328431870
Ca            2.2609502006       -0.0600744649        1.7143079190
Ca            2.5803500800        8.0301042324        5.1805666090
Ca            1.2884866870        2.1466631854        5.2813513288
Ca            3.5158951682        6.0372944022        1.5643802295
Na           -3.4620658996        6.2795759096        5.1320586858
P             3.0867436650        4.9588322631        5.0692930838
P            -2.6763991933        5.0837191424        1.6232868296
P             7.4815069785        2.9665452844        5.2783593876
P             3.6993356186        0.3106309483        5.0653678851
P             1.0698739046        7.9066715577        1.7873359347
C             1.2319164303        3.3343087228        1.7769185095
O             5.4234243858        4.2067912520        1.5295885888
O            -0.6403864365        3.8380742071        5.3624856051
O            -0.8563492736        6.9192183026        5.0299634841
O             5.4654395719        1.2958222863        1.8055312311
O             1.5979572302        5.3945572754        5.0209743070
O            -1.3937275362        4.1855912819        1.6316785468
O             6.1807498417        3.8078762598        5.2946494123
O             5.0962113435        1.0053557461        5.0068747439
O            -0.2479127385        7.1008839512        1.9479371612
O             3.2273831465        3.4634648722        5.5060881250
O            -2.6816919427        5.9171673155        2.9218077268
O             7.4667745856        2.1504763747        3.9587589893
O             3.0395685571        0.7662604690        6.4089715877
O             1.6807850560        7.4400441153        0.4356710059
O             3.7496780255        5.0285541608        3.6678802859
O             7.4304843715        1.9745826851        6.4795274695
O            -2.5490400608        6.0618753239        0.4335569310
O             2.1013955811        7.5530328240        2.8790462527
O             2.8601969330        0.8778458001        3.8781941654
O             3.7949586106        5.8956756067        6.0712536830
O             0.8670346278        3.0547681296        2.9882678476
O             1.1759918381        2.3994316994        0.8866049917
O             1.5424153852        4.5568348312        1.4666970156
F            -0.0049782532       -0.1503358719        1.6561706198
F             0.1059848801        0.2892097568        5.0465194963


K_POINTS automatic
2 2 3 0 0 0
CELL_PARAMETERS {angstrom}
  9.397300   0.000000   0.000000
 -4.698650   8.138301   0.000000
  0.000000   0.000000   6.878200

*SCF input:*
&CONTROL
  calculation = 'scf'
  etot_conv_thr =   1.0000000000d-06
  forc_conv_thr =   1.0000000000d-05
  outdir = './out/'
  restart_mode = "restart"
  pseudo_dir =
'/home/ikharagpur/Desktop/Aritri/HAP_QE_NEW_FINAL/HAP/convergance/ecut'
  tprnfor = .true.
  tstress = .true.
  verbosity = 'high'
  nstep = 200
/
&SYSTEM
  degauss =   7.3498618000d-03
  ecutrho =   6.40000000000d+02
  ecutwfc =   7.00000000000d+01
  ibrav = 0
  nat = 41
  nosym = .false.
  ntyp = 6
  occupations = 'smearing'
  smearing = 'cold'
/
&ELECTRONS
  conv_thr =   1.000000000d-06
  electron_maxstep = 200
  mixing_beta =   4.0000000000d-01
/

&IONS
    ion_dynamics = "bfgs"
/

&CELL
press_conv_thr = 2.0000000000d-01
/
ATOMIC_SPECIES
Ca     40.078 Ca.upf
Na     22.98977  Na.upf
C      12.01070  C.upf
O      15.99940  O.upf
P      30.973761 P.upf
F      18.99840  F.upf
CELL_PARAMETERS (angstrom)
   9.403522322   0.089346951  -0.122107790
  -4.624574075   8.051846973   0.082501283
  -0.089342394   0.017896376   6.858790895

ATOMIC_POSITIONS (angstrom)
Ca            4.9770967179        2.5653460075       -0.1337751051
Ca            4.9372354934        2.9499612895        3.4521186383
Ca           -0.2034442691        5.2530858364        3.4846530148
Ca           -0.1137416011        5.6308719994        6.8378219159
Ca            8.2977611076        1.8800297962        1.7736446849
Ca            2.2413533700       -0.0004311837        1.6492932113
Ca            2.5998562512        8.0245043365        5.1748616941
Ca            1.2506199411        2.1667262606        5.2671066291
Ca            3.5541793955        6.0330065573        1.5227272245
Na           -3.4956016665        6.2398706047        5.1457184840
P             3.0566889679        4.9793535438        5.0167609882
P            -2.6527279052        5.0483379029        1.6427735806
P             7.4441823231        3.0411198798        5.2001935411
P             3.6424844026        0.3624968438        4.9862395101
P             1.1282750360        7.8820131992        1.8006951844
C             1.2510149622        3.3000132805        1.7883657663
O             5.4429703417        4.2737740659        1.4446893386
O            -0.6738195196        3.8099927194        5.4003635803
O            -0.8628277153        6.8847306005        5.0381510390
O             5.4357139734        1.3538452729        1.7347050153
O             1.5682645853        5.4071648285        4.9732803722
O            -1.3803282481        4.1392385455        1.6342972619
O             6.1476486660        3.8856145701        5.2283043788
O             5.0436443940        1.0499318227        4.9116948440
O            -0.1813703769        7.0691733500        1.9897343088
O             3.1868368926        3.4940352445        5.4742190961
O            -2.6384743048        5.8674555732        2.9521034467
O             7.4112431425        2.2431045948        3.8687306171
O             2.9998260819        0.8176325894        6.3372934848
O             1.7154095157        7.4080787828        0.4394134783
O             3.7349447320        5.0315628428        3.6206036999
O             7.3859083710        2.0358197649        6.3901175611
O            -2.5132765701        6.0348969987        0.4629313985
O             2.1946381316        7.5655991791        2.8668076838
O             2.7966145386        0.9308171326        3.8087744773
O             3.7629853133        5.9368419567        6.0029497429
O             0.8283603096        3.0530829701        2.9898800237
O             1.2402701808        2.3363280977        0.9260179599
O             1.5764439696        4.5094877888        1.4558604255
F            -0.0267498884       -0.1708338921        1.6329080094
F             0.0483918544        0.3169071048        5.0200898238

K_POINTS automatic
2 2 3 0 0 0
Regards,
Aritri Roy
Junior Research Fellow,
Indian Institute of Technology Kharagpur
West Bengal, India
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