I would like to share my final solution 1. Created a combo iterator like the one in OpenNLP https://gist.github.com/wcolen/037a68fca7e8b402b6e0d3e4df4fab49#file-annotationcomboiterator-py
2. Created a sample,py that iterates over UIMA annotations https://gist.github.com/wcolen/5edbdcb1d2b6588fead45bbc2dd4fb5b#file-sample-py William 2017-01-05 1:43 GMT-02:00 William Colen <william.co...@gmail.com>: > Thank you very much, Richard! > > Actually it was an error in my Python iterator. > > I am using sentence detector and tokenizer from OpenNLP. > POS Tagger I am using one created in Python using neural networks ( > https://github.com/erickrf/nlpnet). > > > > 2017-01-04 21:29 GMT-02:00 Richard Eckart de Castilho <r...@apache.org>: > >> Hi William, >> >> what component collection are you using? OpenNLP? Maybe the components >> are not set up completely. If you use OpenNLP with uimaFIT, you might >> find this example here useful: >> >> https://cwiki.apache.org/confluence/display/UIMA/uimaFIT+and+Groovy >> >> Cheers, >> >> -- Richard >> >> > On 04.01.2017, at 21:06, William Colen <william.co...@gmail.com> wrote: >> > >> > Hi, >> > >> > I managed to create a UIMA C++ component that performs POSTagging with >> > Pythonator. It works very well as a standalone annotator. I created a >> XMI >> > with sentence and token annotation, the Python code could iterate them >> and >> > create the POS tags. I could run it as follows >> > >> > runAE.sh PythonAnnotator.xml -xmi xmi_folder >> > >> > >> > Now I am integrating it to the pipeline using UIMA Fit. >> > >> > >> > >> > ... >> > >> > AggregateBuilder builder = new AggregateBuilder(); >> > >> > builder.add(AnalysisEngineFactory.createEngineDescription(Se >> ntDetect.class, >> > >> > SentenceModelResource.PARAM_SENTENCE_MODEL_RESOURCE, >> sentdetectModelRes >> > )); >> > >> > builder.add(AnalysisEngineFactory.createEngineDescription(To >> kenizer.class, >> > >> > TokenizerModelResource.PARAM_TOKENIZER_MODEL_RESOURCE, >> tokenizerModelRes >> > )); >> > >> > builder.add(AnalysisEngineFactory.createEngineDescriptionFromPath( >> > "/complete_path/PythonAnnotator.xml")) >> > >> > >> > AnalysisEngine aggregate = builder.createAggregate(); >> > >> > >> > It runs OK. I can see a log in the Python code that the "process" >> function >> > was called. It loads the type system. I can also run getDocumentText >> and it >> > works as expected. >> > >> > >> > The issue starts when I try to iterate over the sentence annotations. >> They >> > are not there! It works in the standalone version when I read it from >> XMI. >> > >> > >> > Any clue what I am missing? >> > >> > >> > Thank you, >> > >> > William >> >> >
