Hi Yap, I am running off a Mac myself and didn't stumble on this one. A few quick questions: What OS are you running? (Snow Leopard, Lion?) Are you using a compiled vmtk or the one from the binary package? Are you running the pipe from PypePad or from the terminal?
Luca On Sep 21, 2011, at 5:32 AM, Yap, Choon Hwai wrote: > Hi all, > > I'm running levelsetsegementation on the Mac, and encounter this error > everytime I save an output: > > ** __NSAutoreleaseFreedObject(): release of previously deallocated object > (0x1294ca0) ignored > > and the next time I run the same command, it gives a whole lot of errors with > allocating memory. > > Any help will be greatly appreciated..! > > regards, > Yap > > > ----- Original Message ----- > From: vmtk-users-requ...@lists.sourceforge.net > To: vmtk-users@lists.sourceforge.net > Sent: Tuesday, September 13, 2011 3:50:40 AM > Subject: vmtk-users Digest, Vol 47, Issue 2 > > Send vmtk-users mailing list submissions to > vmtk-users@lists.sourceforge.net > > To subscribe or unsubscribe via the World Wide Web, visit > https://lists.sourceforge.net/lists/listinfo/vmtk-users > or, via email, send a message with subject or body 'help' to > vmtk-users-requ...@lists.sourceforge.net > > You can reach the person managing the list at > vmtk-users-ow...@lists.sourceforge.net > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of vmtk-users digest..." > > > Today's Topics: > > 1. Help with VMTK imagewriter (VITALY KHEYFETS) > 2. Re: Help with VMTK imagewriter (ido yerushalmy) > 3. Re: Help with VMTK imagewriter (Luca Antiga) > 4. Compiling VMTK for Slicer 3D (ido yerushalmy) > 5. Re: Compiling VMTK for Slicer 3D (Luca Antiga) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Wed, 7 Sep 2011 15:26:46 -0500 > From: VITALY KHEYFETS <vitaly.kheyf...@utsa.edu> > Subject: [vmtk-users] Help with VMTK imagewriter > To: <vmtk-users@lists.sourceforge.net> > Message-ID: > <67f727f9dc5673439f2a984d7bdfa85a510...@lapis1604.utsarr.net> > Content-Type: text/plain; charset="iso-8859-1" > > Hello, > > This may be a dumb question, but I am trying to read DICOM images and create > a *.vti output file. > > This is my script: vmtkimagereader -ifile C:\DICOM_Imag\Normal_PA_Clean\IM1 > --pipe vmtkimagewriter -ofile image_volume.vti > > I can read and view the images, but when running this code I can't find the > file: image_volume.vti > > What directory should that be saved in? Or is that just stored in memory? > > Thanks, > > Vitaly > -------------- next part -------------- > An HTML attachment was scrubbed... > > ------------------------------ > > Message: 2 > Date: Thu, 8 Sep 2011 08:08:56 +0300 > From: ido yerushalmy <ido.yerusha...@gmail.com> > Subject: Re: [vmtk-users] Help with VMTK imagewriter > To: VITALY KHEYFETS <vitaly.kheyf...@utsa.edu> > Cc: vmtk-users@lists.sourceforge.net > Message-ID: > <CAL8jJRFV6=KS4_E2VMY5xxqteLx7U73NMn83=r3yfpz1f9n...@mail.gmail.com> > Content-Type: text/plain; charset="iso-8859-1" > > Hi Vitaly, > If I'm not mistaking, the file will be saved in the directory from which you > are running PypePad. > Or, if you defined an environment variable for VMTK, in the directory from > which you launched PypePad. > > Hopes this helps, > Ido > > On Wed, Sep 7, 2011 at 11:26 PM, VITALY KHEYFETS > <vitaly.kheyf...@utsa.edu>wrote: > >> ** >> >> Hello, >> >> This may be a dumb question, but I am trying to read DICOM images and >> create a *.vti output file. >> >> This is my script: vmtkimagereader -ifile C:\DICOM_Imag\Normal_PA_Clean\IM1 >> --pipe vmtkimagewriter -ofile image_volume.vti >> >> I can read and view the images, but when running this code I can't find the >> file: image_volume.vti >> >> What directory should that be saved in? Or is that just stored in memory? >> >> Thanks, >> >> Vitaly >> >> >> ------------------------------------------------------------------------------ >> Using storage to extend the benefits of virtualization and iSCSI >> Virtualization increases hardware utilization and delivers a new level of >> agility. Learn what those decisions are and how to modernize your storage >> and backup environments for virtualization. >> http://www.accelacomm.com/jaw/sfnl/114/51434361/ >> _______________________________________________ >> vmtk-users mailing list >> vmtk-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/vmtk-users >> >> > -------------- next part -------------- > An HTML attachment was scrubbed... > > ------------------------------ > > Message: 3 > Date: Fri, 9 Sep 2011 09:07:30 +0200 > From: Luca Antiga <luca.ant...@orobix.com> > Subject: Re: [vmtk-users] Help with VMTK imagewriter > To: ido yerushalmy <ido.yerusha...@gmail.com> > Cc: vmtk-users@lists.sourceforge.net > Message-ID: <b153b698-15d3-45e9-9d3c-75b4b7a2e...@orobix.com> > Content-Type: text/plain; charset="us-ascii" > > Hi Vitaly, > in addition to Ido's suggestion, you can of course specify the full output > path at the command line: > > vmtkimagereader -ifile C:\DICOM_Imag\Normal_PA_Clean\IM1 --pipe > vmtkimagewriter -ofile C:\DICOM_Imag\image_volume.vti > > Best regards > > Luca > > > On Sep 8, 2011, at 7:08 AM, ido yerushalmy wrote: > >> Hi Vitaly, >> If I'm not mistaking, the file will be saved in the directory from which you >> are running PypePad. >> Or, if you defined an environment variable for VMTK, in the directory from >> which you launched PypePad. >> >> Hopes this helps, >> Ido >> >> On Wed, Sep 7, 2011 at 11:26 PM, VITALY KHEYFETS <vitaly.kheyf...@utsa.edu> >> wrote: >> Hello, >> >> This may be a dumb question, but I am trying to read DICOM images and create >> a *.vti output file. >> >> This is my script: vmtkimagereader -ifile C:\DICOM_Imag\Normal_PA_Clean\IM1 >> --pipe vmtkimagewriter -ofile image_volume.vti >> >> I can read and view the images, but when running this code I can't find the >> file: image_volume.vti >> >> What directory should that be saved in? Or is that just stored in memory? >> >> Thanks, >> >> Vitaly >> >> >> ------------------------------------------------------------------------------ >> Using storage to extend the benefits of virtualization and iSCSI >> Virtualization increases hardware utilization and delivers a new level of >> agility. Learn what those decisions are and how to modernize your storage >> and backup environments for virtualization. >> http://www.accelacomm.com/jaw/sfnl/114/51434361/ >> _______________________________________________ >> vmtk-users mailing list >> vmtk-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/vmtk-users >> >> >> ------------------------------------------------------------------------------ >> Doing More with Less: The Next Generation Virtual Desktop >> What are the key obstacles that have prevented many mid-market businesses >> from deploying virtual desktops? How do next-generation virtual desktops >> provide companies an easier-to-deploy, easier-to-manage and more affordable >> virtual desktop >> model.http://www.accelacomm.com/jaw/sfnl/114/51426474/_______________________________________________ >> vmtk-users mailing list >> vmtk-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/vmtk-users > > -------------- next part -------------- > An HTML attachment was scrubbed... > > ------------------------------ > > Message: 4 > Date: Sun, 11 Sep 2011 16:23:07 +0300 > From: ido yerushalmy <ido.yerusha...@gmail.com> > Subject: [vmtk-users] Compiling VMTK for Slicer 3D > To: vmtk-users@lists.sourceforge.net > Message-ID: > <CAL8jJRF=enntqqsyckfh_zbk8-wabtselsfhjaj-k5ovkbn...@mail.gmail.com> > Content-Type: text/plain; charset="iso-8859-1" > > Hi all, > I am using VMTK as a module of Slicer 3D (http://www.slicer.org/). > I downloaded a few months ago the source code together with Cmake files that > compile into a set of* DLLs that can be used from within Slicer*. > I know the code is the same as the standalone version of VMTK, but the > Cmakes are built differently. > > I'm now looking for this package again and just unable to find it, could > anyone remind me where to look? > > Best regards, > Ido > -------------- next part -------------- > An HTML attachment was scrubbed... > > ------------------------------ > > Message: 5 > Date: Tue, 13 Sep 2011 09:50:28 +0200 > From: Luca Antiga <luca.ant...@orobix.com> > Subject: Re: [vmtk-users] Compiling VMTK for Slicer 3D > To: ido yerushalmy <ido.yerusha...@gmail.com> > Cc: vmtk-users@lists.sourceforge.net > Message-ID: <de262cf5-291f-439e-b07a-9ed085fdd...@gmail.com> > Content-Type: text/plain; charset="us-ascii" > > Hello Ido, > this is where you should look > > http://www.nitrc.org/projects/slicervmtklvlst/ > > but I just noticed that you posted messages on the forum there, so you > probably already know... > > There is a great effort around vmtk in 3D Slicer 4 as well. Daniel Haehn is > in any case the person to contact. > > Best regards > > Luca > > > On Sep 11, 2011, at 3:23 PM, ido yerushalmy wrote: > >> Hi all, >> I am using VMTK as a module of Slicer 3D (http://www.slicer.org/). >> I downloaded a few months ago the source code together with Cmake files that >> compile into a set of DLLs that can be used from within Slicer. >> I know the code is the same as the standalone version of VMTK, but the >> Cmakes are built differently. >> >> I'm now looking for this package again and just unable to find it, could >> anyone remind me where to look? >> >> Best regards, >> Ido >> ------------------------------------------------------------------------------ >> Using storage to extend the benefits of virtualization and iSCSI >> Virtualization increases hardware utilization and delivers a new level of >> agility. Learn what those decisions are and how to modernize your storage >> and backup environments for virtualization. >> http://www.accelacomm.com/jaw/sfnl/114/51434361/_______________________________________________ >> vmtk-users mailing list >> vmtk-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/vmtk-users > > -------------- next part -------------- > An HTML attachment was scrubbed... > > ------------------------------ > > ------------------------------------------------------------------------------ > BlackBerry® DevCon Americas, Oct. 18-20, San Francisco, CA > Learn about the latest advances in developing for the > BlackBerry® mobile platform with sessions, labs & more. > See new tools and technologies. Register for BlackBerry® DevCon today! > http://p.sf.net/sfu/rim-devcon-copy1 > > ------------------------------ > > _______________________________________________ > vmtk-users mailing list > vmtk-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/vmtk-users > > > End of vmtk-users Digest, Vol 47, Issue 2 > ***************************************** > > ------------------------------------------------------------------------------ > All the data continuously generated in your IT infrastructure contains a > definitive record of customers, application performance, security > threats, fraudulent activity and more. Splunk takes this data and makes > sense of it. Business sense. IT sense. Common sense. > http://p.sf.net/sfu/splunk-d2dcopy1 > _______________________________________________ > vmtk-users mailing list > vmtk-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/vmtk-users ------------------------------------------------------------------------------ All the data continuously generated in your IT infrastructure contains a definitive record of customers, application performance, security threats, fraudulent activity and more. Splunk takes this data and makes sense of it. Business sense. IT sense. Common sense. http://p.sf.net/sfu/splunk-d2dcopy1 _______________________________________________ vmtk-users mailing list vmtk-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/vmtk-users
