Dear Ben, 
 this is due to a few packages not installed by default on Ubuntu. This should 
solve your problem: open a terminal and type

sudo apt-get install libxt-dev
sudo apt-get install libgl1-mesa-glx
sudo apt-get install libgl1-mesa-dev
sudo apt-get install python-dev

Then cmake vmtk from scratch, so that VTK grabs the right cmake variables.

As for the PypePad issue, I'm sorry to hear this. We are now decoupling vmtk 
from PypePad, so that pipes will be forked
in a separate process. This should solve the issue, I'll post on the list when 
this is ready to test.

Thanks for your feedbacks

Luca


On May 20, 2012, at 7:14 PM, Dickerhoff, Benjamin R wrote:

> Hey VMTK users,
> 
>     I am trying to install VMTK 1.0 from source on a newly installed version 
> of Ubuntu and have been running into some errors that I'm not quite sure how 
> to fix. When I run "Make" after configuring and generating my Makefiles, I 
> get an error stating: 
> 
> The following variables are used in this project, but they are set to 
> NOTFOUND. Please set them or make sure they are set and tested correctly in 
> the CMake files:
> OPENGL_INCLUDE_DIR (ADVANCED)
> OPENGL_gl_LIBRARY (ADVANCED)
> PYTHON_INCLUDE_DIR (ADVANCED)
> Configuring incomplete, errors occured!
> make[2]: *** [Stamp/VTK/VTK-configure] Error 1
> make[1]: *** [CMakeFiles/VTK.dir/all] Error 2
> make: *** [all] Error 2
> 
> I have very little experience with installing from source and setting up 
> ubuntu operating systems. Any help to allow me to get VMTK off the ground 
> would be appreciated. 
> 
> On a side note, for whatever reason, when VMTK is run through Pypepad on any 
> of our lab's computers (Mac, Linux, and Windows totaling about 7-8 machines), 
> the program has a tendency to freeze on various random occasions, causing us 
> to reboot and re-do  many segmentations. We've found that running VMTK 
> through the Shell window does not produce this same effect and till his point 
> have had almost no trouble running the VMKT scripts. Would anyone have any 
> thoughts as to what we might be doing to cause the constant interruptions? Or 
> what we could avoid doing to prevent the interruptions? 
> 
> Thanks for any help you might be able to offer,
> Ben Dickerhof
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