Dear all,
a friend of mine came up with a dicom data set of the lung. She wants to extract the trachea which is represented with a lower intensity as compared to their environment (since it is filled with air). We tried to use vmtklevelsetsegmentation, but it didn't work due to the inverted intensity distribution, I guess. I tried to invert the dicom data set and read it into vmtk afterwards, but I wasn't successful.
Did anybody have the same problem and could tell me how he/she solved it?
Thank you for any help!
Bye,
Regine
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