Anouk, You would need to have vmtk command line functionality implemented in order to use the vmtkscripts with the system function (http://www.vmtk.org/Main/Installation/).
Ben On Mar 29, 2013, at 7:58 AM, Anouk Post <anoukp...@gmail.com> wrote: > Hi Luca, > > Thanks! > > I do understand how I can open VMTK from MATLAB, but not how to actually run > a VMTK 'script' from MATLAB. When I use the system function it just opens > pypepad. Do you know how I can actually let it run a VMTK script? > > Best wishse, > > Anouk > > On 29 March 2013 12:56, Luca Antiga <luca.ant...@gmail.com> wrote: > Hi Anouk, > you'll probably have to use the system() function in Matlab to call vmtk the > way you call it from the command line. > It should work. > > Luca > > PS: a couple of random references on the system function > > http://stackoverflow.com/questions/6708760/non-blocking-call-to-external-program-without-losing-return-code > http://www.mathworks.com/matlabcentral/newsreader/view_thread/324084 > http://www.perlmonks.org/?node_id=768159 > > On Mar 25, 2013, at 6:06 PM, Anouk Post wrote: > >> Dear VMTK Users, >> I am using VMTK to calculate centerlines of stl files. This is part of a 3D >> reconstruction process for which I use MATLAB. I really want to incorporate >> the VMTK part of the process into my MATLAB code. >> Does anyone know how I can call VMTK from MATLAB and execute a VMTK script? >> Thanks! >> Best wishes, >> Anouk >> >> P.S. My VMTK code is: >> vmtksurfacereader -ifile /Users/.../Phantom_Best_Catheter_now.stl -f "stl" >> --pipe vmtkcenterlines -endpoints 1 -seedselector openprofiles --pipe >> vmtkcenterlinegeometry -ofile /Users/.../Phantom_Best_Catheter_now_output.dat >> >> >> >> ------------------------------------------------------------------------------ >> Everyone hates slow websites. So do we. >> Make your web apps faster with AppDynamics >> Download AppDynamics Lite for free today: >> http://p.sf.net/sfu/appdyn_d2d_mar_______________________________________________ >> vmtk-users mailing list >> vmtk-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/vmtk-users > > > > > -- > Best Wishes, > > Anouk > ------------------------------------------------------------------------------ > Own the Future-Intel(R) Level Up Game Demo Contest 2013 > Rise to greatness in Intel's independent game demo contest. Compete > for recognition, cash, and the chance to get your game on Steam. > $5K grand prize plus 10 genre and skill prizes. Submit your demo > by 6/6/13. > http://altfarm.mediaplex.com/ad/ck/12124-176961-30367-2_______________________________________________ > vmtk-users mailing list > vmtk-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/vmtk-users ------------------------------------------------------------------------------ Own the Future-Intel® Level Up Game Demo Contest 2013 Rise to greatness in Intel's independent game demo contest. Compete for recognition, cash, and the chance to get your game on Steam. $5K grand prize plus 10 genre and skill prizes. Submit your demo by 6/6/13. http://p.sf.net/sfu/intel_levelupd2d _______________________________________________ vmtk-users mailing list vmtk-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/vmtk-users
