I forgot to point that I know this solution and it is fine for me. But my organization wants to have the data exchange through the SSL, which requires changing java viewer to use SSL sockets ( I have already done that) and vnc server to use for example openSSL library.
The problem is that I am not so experienced with linux and C, that is why I am asking for help.


But thanks anyway Rach.

You don't use SSL, you use SSH which is already on your Linux server:
http://faq.gotomyvnc.com/fom-serve/cache/30.html

You log into your server via ssh by going like so:
ssh username -L clientport:host:hostport [EMAIL PROTECTED]
then locally you open your vncviewer and point it to localhost:viewernumber

Rach
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