Hello again, This is a followup to my last question: I found out that there is an option to exclude sqlite3, and I used it as in the following command. However, I now get a new problem with fftw. Could you please take a look?
Thanks! Nikos Input: ./build.sh --prefix /home/bentenin/programs/votca-1.1.2 -DGSL_INCLUDE_DIR=$HOME/programs/gsl-1.0/include -DGSL_LIBRARY=$HOME/programs/gsl-1.0/lib/libgsl.so -DCBLAS_LIBRARY=$HOME/programs/gsl-1.0/lib/libgslcblas.so -DFFTW3_INCLUDE_DIR=$HOME/programs/fftw-3.2.1d/include -DFFTW3_LIBRARY=$HOME/programs/fftw-3.2.1d/lib -DGMX_INCLUDE_DIR=$HOME/programs/gromacs-4.5.3/include -DGMX_LIBRARY=$HOME/programs/gromacs-4.5.3/lib -DSQLITE_INCLUDE_DIR=$HOME/programs/sqlite-3.7.6.4/include -DSQLITE_LIBRARY=$HOME/programs/sqlite-3.7.6.4/lib -DEXTERNAL_BOOST=OFF -DWITH_SQLITE3=OFF tools Output: libvotca_tools.so.2: undefined reference to `fftw_plan_dft_r2c_1d' libvotca_tools.so.2: undefined reference to `fftw_plan_r2r_1d' libvotca_tools.so.2: undefined reference to `fftw_plan_dft_c2r_1d' libvotca_tools.so.2: undefined reference to `fftw_execute' libvotca_tools.so.2: undefined reference to `fftw_destroy_plan' libvotca_tools.so.2: undefined reference to `fftw_free' libvotca_tools.so.2: undefined reference to `fftw_malloc' collect2: ld returned 1 exit status make[2]: *** [src/libtools/linktest] Error 1 make[1]: *** [src/libtools/CMakeFiles/linktest.dir/all] Error 2 make: *** [all] Error 2 On Thu, Jun 23, 2011 at 4:35 PM, Nikos Bentenitis <bente...@southwestern.edu> wrote: > Hello Christoph, > > I did not manage to use the cmake GUIs so I tried to enter the library > locations using the command line. Unfortunately, I am stuck with > sqlite3. If I use the sqlite3 libraries installed on my machine > build.sh quits with errors. After I install sqlite3 on my home > directory, build.sh quits with the same errors. I included the command > lines below as well as the common errors that I get. > > Any suggestions? > > Thanks! > > Nikos > > Here's the command I used without the sqlite3 in my home directory: > > ./build.sh --prefix $HOME/programs/votca-1.1.2 > -DGSL_INCLUDE_DIR=$HOME/programs/gsl-1.0/include > -DGSL_LIBRARY=$HOME/programs/gsl-1.0/lib/libgsl.so > -DCBLAS_LIBRARY=$HOME/programs/gsl-1.0/lib/libgslcblas.so > -DFFTW3_INCLUDE_DIR=$HOME/programs/fftw-3.2.1d/include > -DFFTW3_LIBRARY=$HOME/programs/fftw-3.2.1d/lib > -DGMX_INCLUDE_DIR=$HOME/programs/gromacs-4.5.3/include > -DGMX_LIBRARY=$HOME/programs/gromacs-4.5.3/lib -DEXTERNAL_BOOST=OFF > tools > > and here's the command I used with sqlite3 installed in my home directory: > > ./build.sh --prefix /home/bentenin/programs/votca-1.1.2 > -DGSL_INCLUDE_DIR=$HOME/programs/gsl-1.0/include > -DGSL_LIBRARY=$HOME/programs/gsl-1.0/lib/libgsl.so > -DCBLAS_LIBRARY=$HOME/programs/gsl-1.0/lib/libgslcblas.so > -DFFTW3_INCLUDE_DIR=$HOME/programs/fftw-3.2.1d/include > -DFFTW3_LIBRARY=$HOME/programs/fftw-3.2.1d/lib > -DGMX_INCLUDE_DIR=$HOME/programs/gromacs-4.5.3/include > -DGMX_LIBRARY=$HOME/programs/gromacs-4.5.3/lib > -DSQLITE_INCLUDE_DIR=$HOME/programs/sqlite-3.7.6.3/include > -DSQLITE_LIBRARY=$HOME/programs/sqlite-3.7.6.3/lib > -DEXTERNAL_BOOST=OFF tools > > And here's the last lines of the output that I got from build.sh > > /home/bentenin/programs/src/tools/include/votca/tools/database.h:36: > error: 'SQLITE_OPEN_READWRITE' was not declared in this scope > /home/bentenin/programs/src/tools/include/votca/tools/database.h:36: > error: 'SQLITE_OPEN_CREATE' was not declared in this scope > /home/bentenin/programs/src/tools/src/libtools/database.cc: In member > function 'void votca::tools::Database::Open(std::string, int)': > /home/bentenin/programs/src/tools/src/libtools/database.cc:33: error: > 'SQLITE_OPEN_READWRITE' was not declared in this scope > /home/bentenin/programs/src/tools/src/libtools/database.cc:33: error: > 'SQLITE_OPEN_CREATE' was not declared in this scope > /home/bentenin/programs/src/tools/src/libtools/database.cc:33: error: > 'sqlite3_open_v2' was not declared in this scope > /home/bentenin/programs/src/tools/src/libtools/random.cc: In static > member function 'static int > votca::tools::Random::rand_uniform_int(int)': > /home/bentenin/programs/src/tools/src/libtools/random.cc:153: warning: > converting to 'int' from 'double' > /home/bentenin/programs/src/tools/src/libtools/database.cc: In member > function 'votca::tools::Statement* > votca::tools::Database::Prepare(std::string)': > /home/bentenin/programs/src/tools/src/libtools/database.cc:56: error: > 'sqlite3_prepare_v2' was not declared in this scope > make[2]: *** [src/libtools/CMakeFiles/votca_tools.dir/database.cc.o] Error 1 > make[2]: *** Waiting for unfinished jobs.... > make[1]: *** [src/libtools/CMakeFiles/votca_tools.dir/all] Error 2 > make: *** [all] Error 2 > -- You received this message because you are subscribed to the Google Groups "votca" group. To post to this group, send email to votca@googlegroups.com. To unsubscribe from this group, send email to votca+unsubscr...@googlegroups.com. For more options, visit this group at http://groups.google.com/group/votca?hl=en.
