Thank you for the fix, Christoph. I was able to install the tools but I am now stuck with csg. I think this is probable due to a mistake I made with the command line. Can you review it, along with a fragment of the output from CMakeError.log and tell me what you think?
Thanks! ./build.sh --prefix $HOME/programs/votca-1.2 -DGSL_INCLUDE_DIR=$HOME/programs/gsl-1.0/include -DGSL_LIBRARY=$HOME/programs/gsl-1.0/lib/libgsl.so -DCBLAS_LIBRARY=$HOME/programs/gsl-1.0/lib/libgslcblas.so -DFFTW3_INCLUDE_DIR=$HOME/programs/fftw-3.2.1/include -DFFTW3_LIBRARY=$HOME/programs/fftw-3.2.1/lib/libfftw3.so -DGMX_INCLUDE_DIR=$HOME/programs/gromacs-4.5.3/include -DGMX_LIBRARY=$HOME/programs/gromacs-4.5.3/lib -DVOTCA_TOOLS_LIBRARY='$HOME/programs/votca-1.2/lib/libvotca_tools.so;$HOME/programs/gsl-1.0/lib/libgsl.so;$HOME/programs/gsl-1.0/lib/libgslcblas.so.0;/usr/lib64/libm.so;$HOME/programs/fftw-3.2.1/lib/libfftw3.so' -DEXTERNAL_BOOST=OFF -DWITH_SQLITE3=OFF csg Fragment of CMakeError.log /usr/bin/ld: warning: libgsl.so.0, needed by /home/bentenin/programs/votca-1.1.2/lib/libvotca_tools.so, not found (try using -rpath or -rpath-link) /usr/bin/ld: warning: libgslcblas.so.0, needed by /home/bentenin/programs/votca-1.1.2/lib/libvotca_tools.so, not found (try using -rpath or -rpath-link) /usr/bin/ld: warning: libfftw3.so.3, needed by /home/bentenin/programs/votca-1.1.2/lib/libvotca_tools.so, not found (try using -rpath or -rpath-link) On Fri, Jun 24, 2011 at 2:55 PM, Christoph Junghans <[email protected]> wrote: > 2011/6/24 Nikos Bentenitis <[email protected]>: >> This is a followup to my last question: I found out that there is an >> option to exclude sqlite3, and I used it as in the following command. >> However, I now get a new problem with fftw. Could you please take a >> look? > There is just a typo in -DFFTW3_LIBRARY, it must be > -DFFTW3_LIBRARY=$HOME/programs/fftw-3.2.1d/lib/libfftw3.so > mind the 'libfftw3.so' at the end. In case you have only a static > version of fftw, it should be > -DFFTW3_LIBRARY=$HOME/programs/fftw-3.2.1d/lib/libfftw3.a > > Cheers, > > Christoph >> >> Input: >> ./build.sh --prefix /home/bentenin/programs/votca-1.1.2 >> -DGSL_INCLUDE_DIR=$HOME/programs/gsl-1.0/include >> -DGSL_LIBRARY=$HOME/programs/gsl-1.0/lib/libgsl.so >> -DCBLAS_LIBRARY=$HOME/programs/gsl-1.0/lib/libgslcblas.so >> -DFFTW3_INCLUDE_DIR=$HOME/programs/fftw-3.2.1d/include >> -DFFTW3_LIBRARY=$HOME/programs/fftw-3.2.1d/lib >> -DGMX_INCLUDE_DIR=$HOME/programs/gromacs-4.5.3/include >> -DGMX_LIBRARY=$HOME/programs/gromacs-4.5.3/lib >> -DEXTERNAL_BOOST=OFF -DWITH_SQLITE3=OFF tools >> >> Output: >> libvotca_tools.so.2: undefined reference to `fftw_plan_dft_r2c_1d' >> libvotca_tools.so.2: undefined reference to `fftw_plan_r2r_1d' >> libvotca_tools.so.2: undefined reference to `fftw_plan_dft_c2r_1d' >> libvotca_tools.so.2: undefined reference to `fftw_execute' >> libvotca_tools.so.2: undefined reference to `fftw_destroy_plan' >> libvotca_tools.so.2: undefined reference to `fftw_free' >> libvotca_tools.so.2: undefined reference to `fftw_malloc' >> collect2: ld returned 1 exit status >> make[2]: *** [src/libtools/linktest] Error 1 >> make[1]: *** [src/libtools/CMakeFiles/linktest.dir/all] Error 2 >> make: *** [all] Error 2 >> >> -- >> This email was Anti Virus checked by Astaro Security Gateway. >> http://www.astaro.com >> > > > > -- > Dr. Christoph Junghans > Max Planck Institute for Polymer Research > Theory Group > POBox 3148 > D 55021 Mainz, Germany > > Phone: +49 6131 379 335 > Web: http://www.mpip-mainz.mpg.de/~junghans > -- You received this message because you are subscribed to the Google Groups "votca" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/votca?hl=en.
