On Thursday, August 15, 2013 1:08:58 PM UTC+1, [email protected] wrote:
>
> Dear Users,
>
> I am trying to create gromacs table for dihedrals:
>
> csg_call --options table.xml --ia-type bonded convert_potential gromacs 
> 9dihedralRES_extr table_d9.xvg
>
> where table.xml
>
> <cg>
> <inverse>
> <gromacs>
> <pot_max>1e4</pot_max>
> <table_end>180</table_end>
> <table_bins>0.05</table_bins>
> </gromacs>
> </inverse>
> </cg>
>
> But the table_d9.xvg starts from 0 to 180... I wish it starts from -180 to 
> 180. How can I specify it?
>
> Steven
>

This command resamples and extrapolates... so not needed. I just want to 
convert my resampled and extrapolated dihedral to gromacs xvg:

csg_call convert_potential xvg 19dihedralRES table_d19.xvg --type bond

ERROR: table_to_xvg.pl: table for type non-bonded should begin with 0, but 
I found -180

How can I do this with dihedrals?

Steven




 

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