Hi Guo, Instead of NVT you may proceed with NPT with plucking off the constraints. Once your system is equilibrated, then you may proceed for NVT.
Chandan -- Chandan kumar Choudhury NCL, Pune INDIA On Tue, Oct 15, 2013 at 9:06 AM, 郭志成 <[email protected]> wrote: > Hi > > > When I am running the NVT simulation, I get the LINCS warning message in the > enclosure file (nohup.out). We use the Amorphous cell tools in Materials > Studio to build the simulation box containing 856 molecules with the density > of 1.8g/cm > 3 > (box length=5.597nm).What's the problem about my simulation? Whether the > simulation box is too small? How can I fix it? Thanks for anyone's help. > > Best regards! > > Zhicheng Guo > > -- > You received this message because you are subscribed to the Google Groups > "votca" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/votca. > For more options, visit https://groups.google.com/groups/opt_out. > -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/votca. For more options, visit https://groups.google.com/groups/opt_out.
