Hi Christoph Yes i forgot. Thank you. Marc El nov 4, 2013 10:34 p.m., "Christoph Junghans" <[email protected]> escribió:
> 2013/11/4 Marc Segovia <[email protected]>: > > Hi Sikandar > > > > Thank you by your answer, I understand, I was using an older version, > now > > I try to install the lastest development version c84b0c95a78c, but an > error > > appears. > > I don't get exactly what's is going on , but I keep trying, do you have > any > > guess ? > > > > Best Regards > > Marc > > > > ...... > > [ 25%] Building CXX object > src/libcsg/CMakeFiles/votca_csg.dir/imcio.cc.o > > [ 26%] Building CXX object > > src/libcsg/CMakeFiles/votca_csg.dir/nematicorder.cc.o > > [ 27%] Building CXX object > > src/libcsg/CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o > > [ 28%] Building CXX object > > src/libcsg/CMakeFiles/votca_csg.dir/csgapplication.cc.o > > /home/marc/votca1.3/votca.csg/src/libcsg/csgapplication.cc: In member > > function ‘virtual void > > votca::csg::CsgApplication::ShowHelpText(std::ostream&)’: > > /home/marc/votca1.3/votca.csg/src/libcsg/csgapplication.cc:120:45: error: > > ‘VisibleOptions’ was not declared in this scope > > make[2]: *** [src/libcsg/CMakeFiles/votca_csg.dir/csgapplication.cc.o] > Error > > 1 > > make[1]: *** [src/libcsg/CMakeFiles/votca_csg.dir/all] Error 2 > > make: *** [all] Error 2 > My guess is, you forgot to update your tools version! > > Cheers, > > Christoph > > > > > > > > > On Fri, Nov 1, 2013 at 11:57 PM, Sikandar Mashayak <[email protected] > > > > wrote: > >> > >> Hi Marc > >> > >> The option "nknots_cutoff" was earlier used in the settings.xml file to > >> specify number of cubic B-spline knots near the cut off which should be > >> forced to value 0.0 to ensure that CG potential smoothly goes to zero > near > >> the cut-off. > >> > >> Later, I decided to fix this nknots_cutoff = 4 because I think fixing 4 > >> knot values near the cut-off is sufficient in most of the cases and user > >> should not worry about this number. Hence, instead of taking this > number as > >> an input from user, it is fixed in the source code. > >> > >> You should not get the error "property not found: nknots_cutoff" if you > >> are using latest source code of votca-csg (i.e., revision > > 681d33b7942b). > >> > >> So could you please check if you are correctly downloading the latest > >> version and installing it. Because, I dont get the same error, when I > test > >> the water spce relative entropy tutorial with the latest development > version > >> of csg source code. > >> > >> You can check if you are using the latest version of votca-csg by > running > >> "csg_inverse -h" it will print out the version of votca-csg that you are > >> using. > >> > >> Let us know if you face issues with updating and installing the latest > >> development version of votca-csg. > >> > >> Thanks > >> Sikandar > >> > >> > >> > >> On Fri, Nov 1, 2013 at 6:03 PM, Marc Segovia <[email protected]> > >> wrote: > >>> > >>> Good Night Everyone > >>> > >>> I am trying to run re tutorial with spce, but an error appear about > >>> nknots_cutoff property, I update my dev version without sucess, any > >>> suggestion ? > >>> > >>> Wishing a very good weekend and thanking in advance . > >>> > >>> Marc > >>> > >>> Dr. Marc Segovia > >>> CCBG > >>> Facultad de Quimica > >>> Universidad de la Republica > >>> 11800 Montevideo > >>> Uruguay > >>> > >>> ~/votca1.3/csg-tutorials.votca-695b567ead5c/spce/re/step_000 > >>> Generating potential tables from the initial parameters > >>> Running critical command 'csg_reupdate --gentable true --param-in-ext > >>> param.new --options > >>> > /home/marc/votca1.3/csg-tutorials.votca-695b567ead5c/spce/re/settings.xml' > >>> an error occurred: > >>> property not found: nknots_cutoff > >>> > >>> Callstack: > >>> /home/marc/votca1.3/share/votca/scripts/inverse/inverse.sh - linenumber > >>> 166 > >>> do_external - linenumber 171 in > >>> /home/marc/votca1.3/share/votca/scripts/inverse/functions_common.sh > >>> /home/marc/votca1.3/share/votca/scripts/inverse/prepare_re.sh - > >>> linenumber 36 > >>> critical - linenumber 4 (see 'csg_call --cat function > >>> critical') > >>> die - linenumber 2 (see 'csg_call --cat function die') > >>> > >>> > ################################################################################################################################################################ > >>> # > >>> # > >>> # ERROR: > >>> # > >>> # critical: 'csg_reupdate --gentable true --param-in-ext param.new > >>> --options > >>> > /home/marc/votca1.3/csg-tutorials.votca-695b567ead5c/spce/re/settings.xml' > >>> failed # > >>> # For details see the logfile > >>> > /home/marc/votca1.3/csg-tutorials.votca-695b567ead5c/spce/re/inverse.log > >>> # > >>> # > >>> # > >>> > >>> > ################################################################################################################################################################ > >>> die: (called from 318) CSG_MASTER_PID is 31799 > >>> die: pids to kill: 31799 318 > >>> > >>> -- > >>> You received this message because you are subscribed to the Google > Groups > >>> "votca" group. > >>> To unsubscribe from this group and stop receiving emails from it, send > an > >>> email to [email protected]. > >>> To post to this group, send email to [email protected]. > >>> Visit this group at http://groups.google.com/group/votca. > >>> For more options, visit https://groups.google.com/groups/opt_out. > >> > >> > >> -- > >> You received this message because you are subscribed to the Google > Groups > >> "votca" group. > >> To unsubscribe from this group and stop receiving emails from it, send > an > >> email to [email protected]. > >> To post to this group, send email to [email protected]. > >> Visit this group at http://groups.google.com/group/votca. > >> For more options, visit https://groups.google.com/groups/opt_out. > > > > > > -- > > You received this message because you are subscribed to the Google Groups > > "votca" group. > > To unsubscribe from this group and stop receiving emails from it, send an > > email to [email protected]. > > To post to this group, send email to [email protected]. > > Visit this group at http://groups.google.com/group/votca. > > For more options, visit https://groups.google.com/groups/opt_out. > > > > -- > Christoph Junghans > Web: http://www.compphys.de > > -- > You received this message because you are subscribed to the Google Groups > "votca" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/votca. > For more options, visit https://groups.google.com/groups/opt_out. > -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/votca. For more options, visit https://groups.google.com/groups/opt_out.
