> > Is it normal? Might Numpy improve on the speed?
> Did octave took a long time to run or csg_stat?
> The octave runtime depends a lot on the step size (=size of the matrices).

- missed this, wanted to ask: you mean the step size in tag cg.non-bonded.step ?

Thanks

> Christoph
> >
> > Thank you for your clues.
> >
> > Andrey
> >
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> Christoph Junghans
> Web: http://www.compphys.de

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