2017-04-12 21:51 GMT-06:00 Alireza Moradzadeh <a.mr...@gmail.com>:
> Dear All,
>
> I need to have access to All-Atom MD and Coarse-Grained MD simulations and
> do some calculation based on frames trajectories. Current version of votca
> using csgapplication only loads one trajectory file using TrajectoryReader *
> _traj_reader, However, I need to define another worker and trajectory
> reader. I am not sure if I have to change csgapplication or try to implement
> a new thread, worker and evalconfiguration just for my own function (lets
> say csg_xxx.cc) .
> In other words, I need to do some calculation on CGMD and AAMD to calculate
> some properties, so I want to have access to both of them in the same
> program csg_xxx.cc and I want it to be parallel.
>
> Any recommendation is highly appreciated!
Have a look at the code of csg_map:
<https://github.com/votca/csg/blob/master/src/tools/csg_map.cc>
and especially on how the "hybrid" option is implemented.
This option is using the coarse-grained and atomistic trajectory at
the same time.

Christoph
>
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-- 
Christoph Junghans
Web: http://www.compphys.de

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