2017-07-27 16:49 GMT-06:00 M. Chakraborty <maghesre...@gmail.com>:
> Hello,
> I am trying to retrieve pairwise forces from original gromacs trajectory. I
> have tried using csg_fmatch with the -no-map tag. I get nan-s for my forces.
> Do I have to  change the bond/non-bond  section in the options xml file in
> anyway before I can use fmatch with -no-map?
I am not sure if csg_fmatch can actually work without a mapping file.
That is more a question for the other Christoph.

However, I would run csg_stat with a similar option file first to make
sure you got the globbing of the particle types right.

Christoph
>
> Thanks in advance.
>
> M. Chakraborty
>
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-- 
Christoph Junghans
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