Thank you, this error has disappeared. But now I have follow: /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_thread_num' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_num_threads' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_num_procs' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `GOMP_parallel_start' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_max_threads' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `GOMP_parallel_end' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_set_num_threads' collect2: error: ld returned 1 exit status make[2]: *** [csg/src/tools/csg_dump] Error 1 make[1]: *** [csg/src/tools/CMakeFiles/csg_dump.dir/all] Error 2 make[1]: *** Waiting for unfinished jobs.... /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_thread_num' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_num_threads' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_num_procs' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `GOMP_parallel_start' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_max_threads' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `GOMP_parallel_end' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_set_num_threads' collect2: error: ld returned 1 exit status make[2]: *** [csg/src/tools/csg_resample] Error 1 make[1]: *** [csg/src/tools/CMakeFiles/csg_resample.dir/all] Error 2 /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_thread_num' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_num_threads' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_num_procs' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `GOMP_parallel_start' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_max_threads' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `GOMP_parallel_end' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_set_num_threads' collect2: error: ld returned 1 exit status make[2]: *** [csg/src/tools/csg_gmxtopol] Error 1 make[1]: *** [csg/src/tools/CMakeFiles/csg_gmxtopol.dir/all] Error 2 /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_thread_num' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_num_threads' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_num_procs' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `GOMP_parallel_start' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_get_max_threads' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `GOMP_parallel_end' /usr/lib64/gcc/x86_64-suse-linux/6/../../../../x86_64-suse-linux/bin/ld: ../libcsg/libvotca_csg.so.6: undefined reference to `omp_set_num_threads' collect2: error: ld returned 1 exit status make[2]: *** [csg/src/tools/csg_stat] Error 1 make[1]: *** [csg/src/tools/CMakeFiles/csg_stat.dir/all] Error 2 =>> PBS: job killed: ncpus 2.84 exceeded limit 1 (sum) -bash: line 1: 629 Terminated /var/spool/PBS/mom_priv/jobs/1059153.vm-pbs.SC make[2]: *** [ctp/src/libctp/CMakeFiles/votca_ctp.dir/calculatorfactory.cc.o] Terminated make[2]: *** [ctp/src/libctp/CMakeFiles/votca_ctp.dir/ewaldnd.cc.o] Terminated make[2]: *** [ctp/src/libctp/CMakeFiles/votca_ctp.dir/extractorfactory.cc.o] Terminated make[2]: *** [ctp/src/libctp/CMakeFiles/votca_ctp.dir/fragment.cc.o] Terminated make[2]: *** wait: No child processes. Stop. make[2]: *** Waiting for unfinished jobs.... make[2]: *** wait: No child processes. Stop. make[1]: *** [ctp/src/libctp/CMakeFiles/votca_ctp.dir/all] Error 2 make: *** [all] Terminated
вторник, 8 октября 2019 г., 21:09:32 UTC+7 пользователь Christoph Junghans написал: > > On Tue, Oct 8, 2019 at 5:54 AM Кирилл Максимович Шеповалов > <[email protected] <javascript:>> wrote: > > > > Greating all! > > > > Please, help me with VOTCA installation. > > > > I received the follow error massage, after entering "make": > > > > txt2tags not found, help cmake to find it by setting TXT2TAGS_EXECUTABLE > This doesn't matter as txt2tags is just needed to build documentation. > > > CMake Warning: > > Manually-specified variables were not used by the project: > > > > USE_CPU_MKL > Yeah as CMake suggests USE_CPU_MKL is not used by VOTCA and hence > changes nothing. > > MKL is really only needed for votca-xtp, you can compile without MKL, > by setting CMAKE_DISABLE_FIND_PACKAGE_MKL=ON when you call CMake. > > Christoph > > > > > > Current git revision is 1f6316d > > make[2]: *** No rule to make target > 'MKL_ThreadLayer_LINK_LIBRARY-NOTFOUND', needed by > 'tools/src/libtools/libvotca_tools.so.6'. Stop. > > make[1]: *** [tools/src/libtools/CMakeFiles/votca_tools.dir/all] Error 2 > > make: *** [all] Error 2 > > make: *** No rule to make target 'check'. Stop. > > Current git revision is 1f6316d > > make[2]: *** No rule to make target > 'MKL_ThreadLayer_LINK_LIBRARY-NOTFOUND', needed by > 'tools/src/libtools/libvotca_tools.so.6'. Stop. > > make[1]: *** [tools/src/libtools/CMakeFiles/votca_tools.dir/all] Error 2 > > make: *** [all] Error 2 > > > > If you have any ideas, answer me, please. > > > > Sinserely, > > Kirill Shepovalov > > > > -- > > You received this message because you are subscribed to the Google > Groups "votca" group. > > To unsubscribe from this group and stop receiving emails from it, send > an email to [email protected] <javascript:>. > > To view this discussion on the web visit > https://groups.google.com/d/msgid/votca/ab2846c9-2ebb-4a71-8a14-a2a6eddada3d%40googlegroups.com. > > > > > > -- > Christoph Junghans > Web: http://www.compphys.de > -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/votca/2443d2f3-fe54-404d-93bc-5702af179832%40googlegroups.com.
