Hello,
I am trying to follow the csg tutorials given in votca. I tried executing
the run.sh script in the folder spce/atomistic and I got errors, which I
have attached to this post.
The commands that led to the error were:
echo Calculating distributions
csg_stat --top topol.tpr --trj traj.trr --cg water.xml --options
settings.xml --nt $nt --begin $equi
echo "Mapping confout.gro to get the starting configuration for
coarse-grained runs of ibi/imc/re"
csg_map --top topol.tpr --trj confout.gro --cg water.xml --out conf_cg.gro
I obtained all the dependencies to run votca using spack, and to be able to
use csg_stat, csg_map from the terminal, I added the following to the path:
PATH=$PATH:~/software/spack*/opt/spack/linux-rhel7-broadwell/gcc-9.3.1/votca-csg-2021-vh2kxfbymv
udsn3en3wk5xxnie4j73nq/bin *
The path in bold are directories I obtained when I obtained spack the
following way:
git clone https://github.com/spack/spack.git spack
source spack/share/spack/setup-env.sh
spack install votca-csg
My question is, what am I doing wrong to encounter this error, and be
unable to run the tutorials?
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Calculating distributions
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
an error occurred:
error parsing command line: the required argument for option '--begin' is
missing
Mapping confout.gro to get the starting configuration for coarse-grained runs
of ibi/imc/re
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) thread 0:
#000: H5T.c line 1708 in H5Tcopy(): not a datatype or dataset
major: Invalid arguments to routine
minor: Inappropriate type
Reading file topol.tpr, VERSION 2019.6 (single precision)
I have 6540 beads in 2180 molecules
I have 2180 beads in 2180 molecules for the coarsegraining
writing coarse-grained trajectory to conf_cg.gro
