You can get around the issue with the clock by switching from the old 
'init.d' approach to the systemctl equivalent. (With the versions of 
Raspbian - which I assume you are using on the RPi - any files in the 
'init.d' directories are automatically converted to a (roughly) equivalent 
systemctl script anyway which is then used.)
Using systemctl you can make sure that weewx does not start up until the 
network system time etc. are all set and available - as far as I know you 
cannot do this with the old way.
Susan

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