I am almost certain now the issue is not WeeWX. Look at the mapped packets. 
From the 5n1:

Jul 13 06:24:04 raspberrypi weewx[29012]: interceptor: MainThread: mapped 
packet: {'txBatteryStatus': 0, 'dateTime': 1563013445, 'pressure': 28.09, 
'windSpeed': 0.0, 'rxCheckPercent': 75.0, 'usUnits': 1}

and the tower:

Jul 13 06:24:05 raspberrypi weewx[29012]: interceptor: MainThread: mapped 
packet: {'outHumidity': 90.0, 'outTemp': 61.5, 'usUnits': 1, 'dateTime': 
1563013445}

WeeWX is only picking up the temperature from the tower, the 5n1 temperature is 
being ignored. You could check this is a more user friendly way by running 
WeeWX directly (http://weewx.com/docs/usersguide.htm#Running_directly), this 
will show you the loop packets and archive records being received by WeeWX. I 
expect you will see the correct temperature (only).

Have you confirmed the 5n1 is not sending to WU directly? The raw data received 
from the 5n1 looks very much like the formatted data sent to WU. Simple check 
is to disable WeeWX posting to WU. If WU is still getting the wrong data you 
have your culprit.

Gary

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