I enabled the path through ssh. In /etc/ssh/sshd_config: added PermitUserEnvironment = yes
and added the file ~/.ssh/environment with PATH=/usr/bin/WIEN2k/13 in it. Now the following error appears on the remote node, the local node runs fine: Error in LAPW1 'INILPW' - can't open definition file ^O������^@^@^@^@^@^@^@^A^O������`�^O���^M ^@^P^@| R^P 'LAPW1' - INILPW aborted unsuccessfully. On Wed, Oct 16, 2013 at 1:19 PM, Laurence Marks <[email protected]>wrote: > It may be that you need to add > export PATH=$WIENROOT:$PATH > > You are going in the right direction, but since I don't have ksh I can > only guess. Someone else may know (Europe perhaps asleep now). > > On Wed, Oct 16, 2013 at 3:15 PM, Oliver Albertini <[email protected]> > wrote: > > userconfig does not do anything for ksh, besides print a to-do list: > > > > !!! You are using neither csh, tcsh nor bashrc as your default !!! > > shell. You will have to configure your system by hand > > > > *) add WIEN2k-directory to your seach-path > > *) install aliases > > *) set environment variable EDITOR to your prefered editor > > *) set environment variable SCRATCH to your prefered scratch > > path, to use the working directory set SCRATCH to "./" > > *) set environment variable WIENROOT to your WIEN root directory > > *) set environment variable W2WEB_CASE_BASEDIR to your WIEN cases > > directory > > *) set the "stacksize" to unlimited > > *) set LD_LIBRARY_PATH (if necessary) > > *) if you will be using parallel execution using rsh: edit your > > ~/.rhosts file such that rlogin logs you on to the > > selected systems without asking for a password > > using ssh: generate keys (ssh_keygen) and distribute public key > > Eventually you may have to ask your system administrator > > > > In ksh, the startup script for log-in is .profile, where I had put these > > lines: > > > > > PATH=/usr/bin:/etc:/usr/sbin:/usr/ucb:$HOME/bin:/usr/bin/X11:/sbin:/usr/vacpp/bin:/usr/bin/WIEN2k/13:/home/oliver/scripts:. > > export WIEN_MPIRUN='poe _EXEC_ -procs _NP_' > > export WIENROOT=/usr/bin/WIEN2k/13 > > export PATH > > export W2WEB_CASE_BASEDIR=/home/oliver/data/wiendir > > export SCRATCH=./ > > export EDITOR=vim > > if [ -f $HOME/.kshrc -a -r $HOME/.kshrc ]; then > > ENV=$HOME/.kshrc # set ENV if there is an rc file > > export ENV > > fi > > > > and in .kshrc (for all new shells, not just log-in) I also have the same > > variable settings, minus the if statement. > > > > But it seems that the non-interactive shell receives a different path: > > > > $ ssh stblade02 exec /usr/bin/ksh < echo_path.sh > > > /usr/bin:/etc:/usr/sbin:/usr/ucb:/usr/bin/X11:/sbin:/usr/java5/jre/bin:/usr/java5/bin > > > > > > > > > > On Wed, Oct 16, 2013 at 11:00 AM, Laurence Marks < > [email protected]> > > wrote: > >> > >> You have to make sure that the executables path is known on the other > >> nodes, It looks like you are using ksh (I am not very familiar with > >> it) so you need to have appropriate lines in the initialization files > >> ( .kshrc ??? as a guess) to set this up. The script .userconfig does > >> this for bash/csh, not sure about ksh (never tried). > >> > >> On Wed, Oct 16, 2013 at 12:51 PM, Oliver Albertini <[email protected]> > >> wrote: > >> > Hello, > >> > > >> > To run k-point parallel across different nodes, is it enough to simply > >> > have > >> > w2k installed on all the nodes along with pw-less ssh? I have pw-less > >> > ssh > >> > working among the nodes, but when I try to run another kpoint on > another > >> > node, the shell cannot find the executables: > >> > > >> > $ x lapw1 -p > >> > starting parallel lapw1 at Wed Oct 16 10:48:53 PDT 2013 > >> > -> starting parallel LAPW1 jobs at Wed Oct 16 10:48:53 PDT 2013 > >> > running LAPW1 in parallel mode (using .machines) > >> > 2 number_of_parallel_jobs > >> > [1] 4653272 > >> > [2] 3605022 > >> > ksh: lapw1c: not found. > >> > ksh: fixerror_lapw: not found. > >> > ksh: /home/oliver/data/wiendir/benchmark/test_case: not found. > >> > ksh: lapw1c: not found. > >> > ksh: fixerror_lapw: not found. > >> > [2] - Done ( ( $remote $machine[$p] ... > >> > [1] + Done ( ( $remote $machine[$p] ... > >> > stblade01(1) 0.000u 0.000s 0.1 0.00% 0+0k 0+0io 0pf+0w > >> > stblade02(1) 0.000u 0.000s 0 0.00% 0+0k 0+0io 0pf+0w > >> > test_case.scf1_1: A file or directory in the path name does not exist. > >> > Summary of lapw1para: > >> > stblade01 k=1 user=0 wallclock=6 > >> > stblade02 k=1 user=0 wallclock=0 > >> > 0.1u 0.1s 0:02 8% 0+0k 0+0io 0pf+0w > >> > > >> > > >> > .machines: > >> > 1:stblade01 > >> > 1:stblade02 > >> > > >> > Sincerely, > >> > > >> > Oliver > >> > > >> > > >> > >> > >> > >> -- > >> Professor Laurence Marks > >> Department of Materials Science and Engineering > >> Northwestern University > >> www.numis.northwestern.edu 1-847-491-3996 > >> "Research is to see what everybody else has seen, and to think what > >> nobody else has thought" > >> Albert Szent-Gyorgi > >> _______________________________________________ > >> Wien mailing list > >> [email protected] > >> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > >> SEARCH the MAILING-LIST at: > >> http://www.mail-archive.com/[email protected]/index.html > > > > > > > > -- > Professor Laurence Marks > Department of Materials Science and Engineering > Northwestern University > www.numis.northwestern.edu 1-847-491-3996 > "Research is to see what everybody else has seen, and to think what > nobody else has thought" > Albert Szent-Gyorgi > _______________________________________________ > Wien mailing list > [email protected] > http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > SEARCH the MAILING-LIST at: > http://www.mail-archive.com/[email protected]/index.html >
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