EBernhardson created this task.
EBernhardson added projects: Dumps-Generation, Wikidata.

TASK DESCRIPTION

Was looking into why a number of cirrus dumps this week came out with 0 size (well, 20 but thats just the compression header). From snapshot1007.eqiad.wmnet:/var/log/cirrusdump/cirrusdump-alswiki-20170327-cirrussearch-content.log:

could not allocate 218103807 bytes for translation cache
[Mon Mar 27 16:16:46 2017] [hphp] [24518:7f1008f43100:0:000001] [] Lost parent, LightProcess exiting
[Mon Mar 27 16:16:46 2017] [hphp] [24515:7f1008f43100:0:000001] [] Lost parent, LightProcess exiting

dmesg doesn't have that specific entry, but i see dmesg logs for killing hhvm, php5 and python throughout the day.
Pastie of one such event: P5145

The dmesg output unfortunately only says the program, and not the various command line flags used to run the script. Looking at the machine right now there are a few processes using whats seems like an outsized amount of memory:

  PID USER      PR  NI    VIRT    RES    SHR S  %CPU %MEM     TIME+ COMMAND                                                                                                                                                     
10045 datasets  20   0 8191576 4.729g   3948 R  91.9  7.5  57:09.34 php                                                                                                                                                         
10038 datasets  20   0 8162064 4.726g   3960 R  90.1  7.5  57:19.45 php                                                                                                                                                         
10047 datasets  20   0 8146932 4.714g   3960 R  86.4  7.5  56:59.44 php                                                                                                                                                         
10036 datasets  20   0 8144216 4.714g   3948 S  93.8  7.5  57:33.15 php                                                                                                                                                         
10042 datasets  20   0 8081348 4.645g   3952 S  80.9  7.4  57:15.63 php

Those all belong to this process tree:

root     10021  0.0  0.0  59760   460 ?        S    Mar27   0:00  \_ CRON
datasets 10022  0.0  0.0   4440   548 ?        Ss   Mar27   0:00      \_ /bin/sh -c /usr/local/bin/dumpwikidatattl.sh
datasets 10023  0.0  0.0  12436   920 ?        S    Mar27   0:00          \_ /bin/bash /usr/local/bin/dumpwikidatattl.sh
datasets 10034  0.0  0.0  12432   320 ?        S    Mar27   0:00              \_ /bin/bash /usr/local/bin/dumpwikidatattl.sh
datasets 10038 87.0  7.7 8334096 5127396 ?     R    Mar27  58:41              |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 0 --sharding-factor 5 --format ttl
datasets 10056  0.0  0.0 381892 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 0 --sharding-factor 5 --format ttl
datasets 10063  0.0  0.0 381892 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 0 --sharding-factor 5 --format ttl
datasets 10069  0.0  0.0 381892 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 0 --sharding-factor 5 --format ttl
datasets 10074  0.0  0.0 381892 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 0 --sharding-factor 5 --format ttl
datasets 10078  0.0  0.0 381892 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 0 --sharding-factor 5 --format ttl
datasets 10040  3.6  0.0   4596   788 ?        S    Mar27   2:29              |   \_ gzip
datasets 10035  0.0  0.0  12432   320 ?        S    Mar27   0:00              \_ /bin/bash /usr/local/bin/dumpwikidatattl.sh
datasets 10036 87.4  7.7 8316248 5115320 ?     R    Mar27  58:55              |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 1 --sharding-factor 5 --format ttl
datasets 10054  0.0  0.0 382448 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 1 --sharding-factor 5 --format ttl
datasets 10060  0.0  0.0 382448 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 1 --sharding-factor 5 --format ttl
datasets 10065  0.0  0.0 382448 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 1 --sharding-factor 5 --format ttl
datasets 10071  0.0  0.0 382448 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 1 --sharding-factor 5 --format ttl
datasets 10077  0.0  0.0 382448 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 1 --sharding-factor 5 --format ttl
datasets 10039  3.7  0.0   4596   788 ?        S    Mar27   2:29              |   \_ gzip
datasets 10037  0.0  0.0  12432   320 ?        S    Mar27   0:00              \_ /bin/bash /usr/local/bin/dumpwikidatattl.sh
datasets 10042 86.9  7.6 8253380 5043028 ?     R    Mar27  58:38              |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 2 --sharding-factor 5 --format ttl
datasets 10058  0.0  0.0 381024 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 2 --sharding-factor 5 --format ttl
datasets 10062  0.0  0.0 381024 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 2 --sharding-factor 5 --format ttl
datasets 10066  0.0  0.0 381024 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 2 --sharding-factor 5 --format ttl
datasets 10072  0.0  0.0 381024 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 2 --sharding-factor 5 --format ttl
datasets 10075  0.0  0.0 381024 43760 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 2 --sharding-factor 5 --format ttl
datasets 10043  3.6  0.0   4596   784 ?        S    Mar27   2:29              |   \_ gzip
datasets 10041  0.0  0.0  12432   320 ?        S    Mar27   0:00              \_ /bin/bash /usr/local/bin/dumpwikidatattl.sh
datasets 10047 86.5  7.7 8314868 5111292 ?     R    Mar27  58:20              |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 3 --sharding-factor 5 --format ttl
datasets 10055  0.0  0.0 381068 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 3 --sharding-factor 5 --format ttl
datasets 10059  0.0  0.0 381068 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 3 --sharding-factor 5 --format ttl
datasets 10064  0.0  0.0 381068 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 3 --sharding-factor 5 --format ttl
datasets 10068  0.0  0.0 381068 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 3 --sharding-factor 5 --format ttl
datasets 10070  0.0  0.0 381068 43764 ?        Ss   Mar27   0:00              |   |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 3 --sharding-factor 5 --format ttl
datasets 10048  3.7  0.0   4596   788 ?        S    Mar27   2:29              |   \_ gzip
datasets 10044  0.0  0.0  12432   320 ?        S    Mar27   0:00              \_ /bin/bash /usr/local/bin/dumpwikidatattl.sh
datasets 10045 86.8  7.7 8359512 5129128 ?     R    Mar27  58:30                  \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 4 --sharding-factor 5 --format ttl
datasets 10057  0.0  0.0 380660 41780 ?        Ss   Mar27   0:00                  |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 4 --sharding-factor 5 --format ttl
datasets 10061  0.0  0.0 380660 41780 ?        Ss   Mar27   0:00                  |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 4 --sharding-factor 5 --format ttl
datasets 10067  0.0  0.0 380660 41780 ?        Ss   Mar27   0:00                  |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 4 --sharding-factor 5 --format ttl
datasets 10073  0.0  0.0 380660 41780 ?        Ss   Mar27   0:00                  |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 4 --sharding-factor 5 --format ttl
datasets 10076  0.0  0.0 380660 41780 ?        Ss   Mar27   0:00                  |   \_ php /srv/mediawiki/multiversion/MWScript.php extensions/Wikidata/extensions/Wikibase/repo/maintenance/dumpRdf.php --wiki wikidatawiki --shard 4 --sharding-factor 5 --format ttl
datasets 10046  3.7  0.0   4596   784 ?        S    Mar27   2:30                  \_ gzip

I don't know for sure its the rdf dumping causing this, but it seems a likely culprit


TASK DETAIL
https://phabricator.wikimedia.org/T161577

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To: EBernhardson
Cc: ArielGlenn, Gehel, EBernhardson, Lunewa, QZanden, D3r1ck01, Izno, gnosygnu, Wikidata-bugs, aude, Mbch331
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