Ok, did some more testing today:

1. This occurs with wixstdba or my custom ba
2. Upgrade fails (uninstalls all unchanged packages) when first package in
bundle is unchanged and schedules a reboot
3. Upgrade succeeds if first package in bundle is unchanged but does NOT
schedule a reboot
4. Upgrade succeeds always if the first package in the bundle requires an
upgrade.
5. Created very simple skeleton packages / bundle to confirm nothing to do
with complexity in my packages
6. Full logs attached here Rob (Thank-you) ... These are the logs from the
upgrade (5 files, i.e. main install/uninstall and 3 packages)

http://windows-installer-xml-wix-toolset.687559.n2.nabble.com/file/n7580439/Bundle_20120912171946.log
Bundle_20120912171946.log 
http://windows-installer-xml-wix-toolset.687559.n2.nabble.com/file/n7580439/Bundle_20120912171946_0_C.log
Bundle_20120912171946_0_C.log 
http://windows-installer-xml-wix-toolset.687559.n2.nabble.com/file/n7580439/Bundle_20120912172009.log
Bundle_20120912172009.log 
http://windows-installer-xml-wix-toolset.687559.n2.nabble.com/file/n7580439/Bundle_20120912172009_0_B.log
Bundle_20120912172009_0_B.log 
http://windows-installer-xml-wix-toolset.687559.n2.nabble.com/file/n7580439/Bundle_20120912172009_1_A.log
Bundle_20120912172009_1_A.log 





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