I opened up both MSIs in Orca and compared their version numbers.
The missing files are different, but their version only differs in the 
forth place (which is ignored by MSI). The fourth place of the upgrading 
files is actually higher, so there are no higher version components on 
disk.
Files which are exactly the same (same hash and of course same version 
number) do exist on disk after the upgrade.
Files whose version differs in the first three places are also correctly 
replaced.

The affected DLLs are kind of like third party - they are built 
internally, but the version number is defined by the incremental build and 
I have no way to change the versioning algorithm (different team, ...).
I have also googled some more, and one option seems to be to schedule 
RemoveExistingProducts even earlier, before costing. Would there be any 
downside to that?

Sorry to take so long to follow up and thank you,
Lukas



Von:    Rob Mensching <r...@firegiant.com>
An:     "General discussion about the WiX toolset." 
<wix-users@lists.sourceforge.net>
Datum:  14.04.2015 02:49
Betreff:        Re: [WiX-users] Major upgrade: a few files are not 
installed



You should root cause why higher version Components exist on the machine 
since you scheduled upgrade early.

_____________________________________________________________
 Short replies here. Complete answers over there: 
http://www.firegiant.com/

-----Original Message-----
From: Lukas Rieger [mailto:lrie...@nemetschek-engineering.at] 
Sent: Monday, April 13, 2015 2:29 PM
To: wix-users@lists.sourceforge.net
Subject: Re: [WiX-users] Major upgrade: a few files are not installed

Sorry, I forgot to mention that I am using Burn as Bootstrapper, so I 
can't control the REINSTALLMODE

Thank you,
Lukas

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