Ciao Philippe! works well - I'd suggest to ask the user for
the 3 needed parameters, instead of supplying them as parameters.
# scripts/
Linux directory: [default: /usr/src/linux] :
Adeos-patch: [default: none] :
Architecture: [default: i386]

...or something like that.

./configure also went well, but then:

# make
Making all in src
make[1]: Entering directory `/usr/src/xenomai-2.1/src'
Making all in include
make[2]: Entering directory `/usr/src/xenomai-2.1/src/include'
make  all-recursive
make[3]: Entering directory `/usr/src/xenomai-2.1/src/include'
Making all in asm-uvm
make[4]: Entering directory `/usr/src/xenomai-2.1/src/include/asm-uvm'
make[4]: stat:system.h: Too many levels of symbolic links
make[4]: *** No rule to make target `system.h', needed by `all-am'.  Stop.
make[4]: Leaving directory `/usr/src/xenomai-2.1/src/include/asm-uvm'
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory `/usr/src/xenomai-2.1/src/include'
make[2]: *** [all] Error 2
make[2]: Leaving directory `/usr/src/xenomai-2.1/src/include'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/usr/src/xenomai-2.1/src'
make: *** [all-recursive] Error 1

/usr/src/xenomai-2.1/src/include/asm-uvm# ll
total 36
-rw-r--r--  1 root root 12780 2005-11-03 01:03 Makefile
-rw-r--r--  1 cap  cap     67 2005-11-02 21:36
-rw-r--r--  1 cap  cap  13046 2005-11-02 21:36
lrwxrwxrwx  1 root root    39 2005-11-03 01:03 system.h -> 

Best regards,

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