Module: xenomai-forge
Branch: master
Commit: 38f7cc44752851203e4c3523d2eb2fb840280e6a
URL:    
http://git.xenomai.org/?p=xenomai-forge.git;a=commit;h=38f7cc44752851203e4c3523d2eb2fb840280e6a

Author: Philippe Gerum <r...@xenomai.org>
Date:   Tue Dec 20 09:47:13 2011 +0100

doc: enable back generation

---

 configure                                          |    4 +-
 configure.in                                       |    2 +-
 doc/Makefile.am                                    |    2 +-
 doc/Makefile.in                                    |  279 +++++++++++++++++---
 .../{Doxyfile-posix.in => Doxyfile-cobalt.in}      |   11 +-
 doc/doxygen/Doxyfile-common.in                     |   33 ---
 doc/doxygen/Doxyfile-nucleus.in                    |    6 +-
 doc/doxygen/Doxyfile-rtdm.in                       |    4 +-
 doc/doxygen/Doxyfile.in                            |   23 +-
 doc/doxygen/Makefile.am                            |    4 +-
 doc/doxygen/Makefile.in                            |   12 +-
 doc/man/Makefile.am                                |    1 -
 doc/man/Makefile.in                                |    1 -
 doc/txt/Makefile.am                                |    2 +-
 doc/txt/Makefile.in                                |    2 +-
 15 files changed, 278 insertions(+), 108 deletions(-)

diff --git a/configure b/configure
index 9869004..aa82747 100755
--- a/configure
+++ b/configure
@@ -13745,7 +13745,7 @@ ac_config_files="$ac_config_files Makefile 
config/Makefile scripts/Makefile scri
 
 
 if test \! x$XENO_MAYBE_DOCDIR = x ; then
-      ac_config_files="$ac_config_files doc/Makefile doc/txt/Makefile 
doc/man/Makefile doc/man/clocktest.man doc/man/cyclictest.man 
doc/man/latency.man doc/man/rtcanconfig.man doc/man/rtcanrecv.man 
doc/man/rtcansend.man doc/man/switchbench.man doc/man/switchtest.man 
doc/man/xeno.man doc/man/xeno-config.man doc/doxygen/Makefile 
doc/doxygen/Doxyfile-common doc/doxygen/Doxyfile doc/doxygen/Doxyfile-nucleus 
doc/doxygen/Doxyfile-posix doc/doxygen/Doxyfile-rtdm doc/docbook/Makefile 
doc/docbook/catalog doc/docbook/custom-stylesheets/Makefile 
doc/docbook/custom-stylesheets/xsl/Makefile 
doc/docbook/custom-stylesheets/xsl/common/Makefile 
doc/docbook/custom-stylesheets/xsl/fo/Makefile 
doc/docbook/custom-stylesheets/xsl/html/Makefile 
doc/docbook/custom-stylesheets/xsl/html/chunk.xsl 
doc/docbook/custom-stylesheets/xsl/html/onechunk.xsl 
doc/docbook/xenomai/Makefile"
+      ac_config_files="$ac_config_files doc/Makefile doc/txt/Makefile 
doc/man/Makefile doc/man/clocktest.man doc/man/cyclictest.man 
doc/man/latency.man doc/man/rtcanconfig.man doc/man/rtcanrecv.man 
doc/man/rtcansend.man doc/man/switchbench.man doc/man/switchtest.man 
doc/man/xeno.man doc/man/xeno-config.man doc/doxygen/Makefile 
doc/doxygen/Doxyfile-common doc/doxygen/Doxyfile doc/doxygen/Doxyfile-nucleus 
doc/doxygen/Doxyfile-cobalt doc/doxygen/Doxyfile-rtdm doc/docbook/Makefile 
doc/docbook/catalog doc/docbook/custom-stylesheets/Makefile 
doc/docbook/custom-stylesheets/xsl/Makefile 
doc/docbook/custom-stylesheets/xsl/common/Makefile 
doc/docbook/custom-stylesheets/xsl/fo/Makefile 
doc/docbook/custom-stylesheets/xsl/html/Makefile 
doc/docbook/custom-stylesheets/xsl/html/chunk.xsl 
doc/docbook/custom-stylesheets/xsl/html/onechunk.xsl 
doc/docbook/xenomai/Makefile"
 
 fi
 
@@ -14879,7 +14879,7 @@ do
     "doc/doxygen/Doxyfile-common") CONFIG_FILES="$CONFIG_FILES 
doc/doxygen/Doxyfile-common" ;;
     "doc/doxygen/Doxyfile") CONFIG_FILES="$CONFIG_FILES doc/doxygen/Doxyfile" 
;;
     "doc/doxygen/Doxyfile-nucleus") CONFIG_FILES="$CONFIG_FILES 
doc/doxygen/Doxyfile-nucleus" ;;
-    "doc/doxygen/Doxyfile-posix") CONFIG_FILES="$CONFIG_FILES 
doc/doxygen/Doxyfile-posix" ;;
+    "doc/doxygen/Doxyfile-cobalt") CONFIG_FILES="$CONFIG_FILES 
doc/doxygen/Doxyfile-cobalt" ;;
     "doc/doxygen/Doxyfile-rtdm") CONFIG_FILES="$CONFIG_FILES 
doc/doxygen/Doxyfile-rtdm" ;;
     "doc/docbook/Makefile") CONFIG_FILES="$CONFIG_FILES doc/docbook/Makefile" 
;;
     "doc/docbook/catalog") CONFIG_FILES="$CONFIG_FILES doc/docbook/catalog" ;;
diff --git a/configure.in b/configure.in
index 4890d03..6926ed4 100644
--- a/configure.in
+++ b/configure.in
@@ -722,7 +722,7 @@ if test \! x$XENO_MAYBE_DOCDIR = x ; then
        doc/doxygen/Doxyfile-common \
        doc/doxygen/Doxyfile \
        doc/doxygen/Doxyfile-nucleus \
-       doc/doxygen/Doxyfile-posix \
+       doc/doxygen/Doxyfile-cobalt \
        doc/doxygen/Doxyfile-rtdm \
        doc/docbook/Makefile \
        doc/docbook/catalog \
diff --git a/doc/Makefile.am b/doc/Makefile.am
index 9948063..b9b9066 100644
--- a/doc/Makefile.am
+++ b/doc/Makefile.am
@@ -1,4 +1,4 @@
-#SUBDIRS=docbook doxygen man txt
+SUBDIRS=docbook doxygen man txt
 
 GENERATE_DOC=$(top_srcdir)/scripts/maint/generate-doc
 
diff --git a/doc/Makefile.in b/doc/Makefile.in
index 23f2ca0..5c8bfc3 100644
--- a/doc/Makefile.in
+++ b/doc/Makefile.in
@@ -14,8 +14,6 @@
 # PARTICULAR PURPOSE.
 
 @SET_MAKE@
-
-#SUBDIRS=docbook doxygen man txt
 VPATH = @srcdir@
 pkgdatadir = $(datadir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
@@ -55,7 +53,47 @@ CONFIG_CLEAN_FILES =
 CONFIG_CLEAN_VPATH_FILES =
 SOURCES =
 DIST_SOURCES =
+RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
+       html-recursive info-recursive install-data-recursive \
+       install-dvi-recursive install-exec-recursive \
+       install-html-recursive install-info-recursive \
+       install-pdf-recursive install-ps-recursive install-recursive \
+       installcheck-recursive installdirs-recursive pdf-recursive \
+       ps-recursive uninstall-recursive
+RECURSIVE_CLEAN_TARGETS = mostlyclean-recursive clean-recursive        \
+  distclean-recursive maintainer-clean-recursive
+AM_RECURSIVE_TARGETS = $(RECURSIVE_TARGETS:-recursive=) \
+       $(RECURSIVE_CLEAN_TARGETS:-recursive=) tags TAGS ctags CTAGS \
+       distdir
+ETAGS = etags
+CTAGS = ctags
+DIST_SUBDIRS = $(SUBDIRS)
 DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
+am__relativize = \
+  dir0=`pwd`; \
+  sed_first='s,^\([^/]*\)/.*$$,\1,'; \
+  sed_rest='s,^[^/]*/*,,'; \
+  sed_last='s,^.*/\([^/]*\)$$,\1,'; \
+  sed_butlast='s,/*[^/]*$$,,'; \
+  while test -n "$$dir1"; do \
+    first=`echo "$$dir1" | sed -e "$$sed_first"`; \
+    if test "$$first" != "."; then \
+      if test "$$first" = ".."; then \
+        dir2=`echo "$$dir0" | sed -e "$$sed_last"`/"$$dir2"; \
+        dir0=`echo "$$dir0" | sed -e "$$sed_butlast"`; \
+      else \
+        first2=`echo "$$dir2" | sed -e "$$sed_first"`; \
+        if test "$$first2" = "$$first"; then \
+          dir2=`echo "$$dir2" | sed -e "$$sed_rest"`; \
+        else \
+          dir2="../$$dir2"; \
+        fi; \
+        dir0="$$dir0"/"$$first"; \
+      fi; \
+    fi; \
+    dir1=`echo "$$dir1" | sed -e "$$sed_rest"`; \
+  done; \
+  reldir="$$dir2"
 ACLOCAL = @ACLOCAL@
 AMTAR = @AMTAR@
 AR = @AR@
@@ -215,8 +253,9 @@ target_vendor = @target_vendor@
 top_build_prefix = @top_build_prefix@
 top_builddir = @top_builddir@
 top_srcdir = @top_srcdir@
+SUBDIRS = docbook doxygen man txt
 GENERATE_DOC = $(top_srcdir)/scripts/maint/generate-doc
-all: all-am
+all: all-recursive
 
 .SUFFIXES:
 $(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am  
$(am__configure_deps)
@@ -255,12 +294,141 @@ mostlyclean-libtool:
 
 clean-libtool:
        -rm -rf .libs _libs
+
+# This directory's subdirectories are mostly independent; you can cd
+# into them and run `make' without going through this Makefile.
+# To change the values of `make' variables: instead of editing Makefiles,
+# (1) if the variable is set in `config.status', edit `config.status'
+#     (which will cause the Makefiles to be regenerated when you run `make');
+# (2) otherwise, pass the desired values on the `make' command line.
+$(RECURSIVE_TARGETS):
+       @fail= failcom='exit 1'; \
+       for f in x $$MAKEFLAGS; do \
+         case $$f in \
+           *=* | --[!k]*);; \
+           *k*) failcom='fail=yes';; \
+         esac; \
+       done; \
+       dot_seen=no; \
+       target=`echo $@ | sed s/-recursive//`; \
+       list='$(SUBDIRS)'; for subdir in $$list; do \
+         echo "Making $$target in $$subdir"; \
+         if test "$$subdir" = "."; then \
+           dot_seen=yes; \
+           local_target="$$target-am"; \
+         else \
+           local_target="$$target"; \
+         fi; \
+         ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
+         || eval $$failcom; \
+       done; \
+       if test "$$dot_seen" = "no"; then \
+         $(MAKE) $(AM_MAKEFLAGS) "$$target-am" || exit 1; \
+       fi; test -z "$$fail"
+
+$(RECURSIVE_CLEAN_TARGETS):
+       @fail= failcom='exit 1'; \
+       for f in x $$MAKEFLAGS; do \
+         case $$f in \
+           *=* | --[!k]*);; \
+           *k*) failcom='fail=yes';; \
+         esac; \
+       done; \
+       dot_seen=no; \
+       case "$@" in \
+         distclean-* | maintainer-clean-*) list='$(DIST_SUBDIRS)' ;; \
+         *) list='$(SUBDIRS)' ;; \
+       esac; \
+       rev=''; for subdir in $$list; do \
+         if test "$$subdir" = "."; then :; else \
+           rev="$$subdir $$rev"; \
+         fi; \
+       done; \
+       rev="$$rev ."; \
+       target=`echo $@ | sed s/-recursive//`; \
+       for subdir in $$rev; do \
+         echo "Making $$target in $$subdir"; \
+         if test "$$subdir" = "."; then \
+           local_target="$$target-am"; \
+         else \
+           local_target="$$target"; \
+         fi; \
+         ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
+         || eval $$failcom; \
+       done && test -z "$$fail"
+tags-recursive:
+       list='$(SUBDIRS)'; for subdir in $$list; do \
+         test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) 
tags); \
+       done
+ctags-recursive:
+       list='$(SUBDIRS)'; for subdir in $$list; do \
+         test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) 
ctags); \
+       done
+
+ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
+       list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
+       unique=`for i in $$list; do \
+           if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+         done | \
+         $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+             END { if (nonempty) { for (i in files) print i; }; }'`; \
+       mkid -fID $$unique
 tags: TAGS
-TAGS:
 
+TAGS: tags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+               $(TAGS_FILES) $(LISP)
+       set x; \
+       here=`pwd`; \
+       if ($(ETAGS) --etags-include --version) >/dev/null 2>&1; then \
+         include_option=--etags-include; \
+         empty_fix=.; \
+       else \
+         include_option=--include; \
+         empty_fix=; \
+       fi; \
+       list='$(SUBDIRS)'; for subdir in $$list; do \
+         if test "$$subdir" = .; then :; else \
+           test ! -f $$subdir/TAGS || \
+             set "$$@" "$$include_option=$$here/$$subdir/TAGS"; \
+         fi; \
+       done; \
+       list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+       unique=`for i in $$list; do \
+           if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+         done | \
+         $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+             END { if (nonempty) { for (i in files) print i; }; }'`; \
+       shift; \
+       if test -z "$(ETAGS_ARGS)$$*$$unique"; then :; else \
+         test -n "$$unique" || unique=$$empty_fix; \
+         if test $$# -gt 0; then \
+           $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+             "$$@" $$unique; \
+         else \
+           $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+             $$unique; \
+         fi; \
+       fi
 ctags: CTAGS
-CTAGS:
-
+CTAGS: ctags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+               $(TAGS_FILES) $(LISP)
+       list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+       unique=`for i in $$list; do \
+           if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+         done | \
+         $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+             END { if (nonempty) { for (i in files) print i; }; }'`; \
+       test -z "$(CTAGS_ARGS)$$unique" \
+         || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
+            $$unique
+
+GTAGS:
+       here=`$(am__cd) $(top_builddir) && pwd` \
+         && $(am__cd) $(top_srcdir) \
+         && gtags -i $(GTAGS_ARGS) "$$here"
+
+distclean-tags:
+       -rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
        @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
@@ -292,19 +460,48 @@ distdir: $(DISTFILES)
            || exit 1; \
          fi; \
        done
+       @list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
+         if test "$$subdir" = .; then :; else \
+           test -d "$(distdir)/$$subdir" \
+           || $(MKDIR_P) "$(distdir)/$$subdir" \
+           || exit 1; \
+         fi; \
+       done
+       @list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
+         if test "$$subdir" = .; then :; else \
+           dir1=$$subdir; dir2="$(distdir)/$$subdir"; \
+           $(am__relativize); \
+           new_distdir=$$reldir; \
+           dir1=$$subdir; dir2="$(top_distdir)"; \
+           $(am__relativize); \
+           new_top_distdir=$$reldir; \
+           echo " (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) 
top_distdir="$$new_top_distdir" distdir="$$new_distdir" \\"; \
+           echo "     am__remove_distdir=: am__skip_length_check=: 
am__skip_mode_fix=: distdir)"; \
+           ($(am__cd) $$subdir && \
+             $(MAKE) $(AM_MAKEFLAGS) \
+               top_distdir="$$new_top_distdir" \
+               distdir="$$new_distdir" \
+               am__remove_distdir=: \
+               am__skip_length_check=: \
+               am__skip_mode_fix=: \
+               distdir) \
+             || exit 1; \
+         fi; \
+       done
 check-am: all-am
-check: check-am
+check: check-recursive
 all-am: Makefile
-installdirs:
-install: install-am
-install-exec: install-exec-am
-install-data: install-data-am
-uninstall: uninstall-am
+installdirs: installdirs-recursive
+installdirs-am:
+install: install-recursive
+install-exec: install-exec-recursive
+install-data: install-data-recursive
+uninstall: uninstall-recursive
 
 install-am: all-am
        @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
 
-installcheck: installcheck-am
+installcheck: installcheck-recursive
 install-strip:
        $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
          install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
@@ -321,84 +518,88 @@ distclean-generic:
 maintainer-clean-generic:
        @echo "This command is intended for maintainers to use"
        @echo "it deletes files that may require special tools to rebuild."
-clean: clean-am
+clean: clean-recursive
 
 clean-am: clean-generic clean-libtool mostlyclean-am
 
-distclean: distclean-am
+distclean: distclean-recursive
        -rm -f Makefile
-distclean-am: clean-am distclean-generic
+distclean-am: clean-am distclean-generic distclean-tags
 
-dvi: dvi-am
+dvi: dvi-recursive
 
 dvi-am:
 
-html: html-am
+html: html-recursive
 
 html-am:
 
-info: info-am
+info: info-recursive
 
 info-am:
 
 install-data-am:
 
-install-dvi: install-dvi-am
+install-dvi: install-dvi-recursive
 
 install-dvi-am:
 
 install-exec-am:
 
-install-html: install-html-am
+install-html: install-html-recursive
 
 install-html-am:
 
-install-info: install-info-am
+install-info: install-info-recursive
 
 install-info-am:
 
 install-man:
 
-install-pdf: install-pdf-am
+install-pdf: install-pdf-recursive
 
 install-pdf-am:
 
-install-ps: install-ps-am
+install-ps: install-ps-recursive
 
 install-ps-am:
 
 installcheck-am:
 
-maintainer-clean: maintainer-clean-am
+maintainer-clean: maintainer-clean-recursive
        -rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
-mostlyclean: mostlyclean-am
+mostlyclean: mostlyclean-recursive
 
 mostlyclean-am: mostlyclean-generic mostlyclean-libtool
 
-pdf: pdf-am
+pdf: pdf-recursive
 
 pdf-am:
 
-ps: ps-am
+ps: ps-recursive
 
 ps-am:
 
 uninstall-am:
 
-.MAKE: install-am install-strip
-
-.PHONY: all all-am check check-am clean clean-generic clean-libtool \
-       distclean distclean-generic distclean-libtool distdir dvi \
-       dvi-am html html-am info info-am install install-am \
-       install-data install-data-am install-dvi install-dvi-am \
-       install-exec install-exec-am install-html install-html-am \
-       install-info install-info-am install-man install-pdf \
-       install-pdf-am install-ps install-ps-am install-strip \
-       installcheck installcheck-am installdirs maintainer-clean \
+.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) ctags-recursive \
+       install-am install-strip tags-recursive
+
+.PHONY: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) CTAGS GTAGS \
+       all all-am check check-am clean clean-generic clean-libtool \
+       ctags ctags-recursive distclean distclean-generic \
+       distclean-libtool distclean-tags distdir dvi dvi-am html \
+       html-am info info-am install install-am install-data \
+       install-data-am install-dvi install-dvi-am install-exec \
+       install-exec-am install-html install-html-am install-info \
+       install-info-am install-man install-pdf install-pdf-am \
+       install-ps install-ps-am install-strip installcheck \
+       installcheck-am installdirs installdirs-am maintainer-clean \
        maintainer-clean-generic mostlyclean mostlyclean-generic \
-       mostlyclean-libtool pdf pdf-am ps ps-am uninstall uninstall-am
+       mostlyclean-libtool pdf pdf-am ps ps-am tags tags-recursive \
+       uninstall uninstall-am
 
 
 generate-doc:
diff --git a/doc/doxygen/Doxyfile-posix.in b/doc/doxygen/Doxyfile-cobalt.in
similarity index 97%
rename from doc/doxygen/Doxyfile-posix.in
rename to doc/doxygen/Doxyfile-cobalt.in
index da77a70..498b8a9 100644
--- a/doc/doxygen/Doxyfile-posix.in
+++ b/doc/doxygen/Doxyfile-cobalt.in
@@ -5,7 +5,7 @@
 # The PROJECT_NAME tag is a single word (or a sequence of words surrounded 
 # by quotes) that should identify the project.
 
-PROJECT_NAME           = "Xenomai POSIX skin API"
+PROJECT_NAME           = "Xenomai Cobalt API"
 
 # The INPUT tag can be used to specify the files and/or directories that 
contain 
 # documented source files. You may enter file names like "myfile.cpp" or 
@@ -13,14 +13,15 @@ PROJECT_NAME           = "Xenomai POSIX skin API"
 # with spaces.
 
 INPUT                  = \
-        @top_srcdir@/kernel/cobalt/posix \
+        @top_srcdir@/include/cobalt \
+        @top_srcdir@/kernel/cobalt \
         @top_srcdir@/doc/doxygen
 
 # The EXAMPLE_PATH tag can be used to specify one or more files or 
 # directories that contain example code fragments that are included (see 
 # the \include command).
 
-EXAMPLE_PATH           =  @top_srcdir@/examples/posix
+EXAMPLE_PATH           =
 
 #---------------------------------------------------------------------------
 # configuration options related to the HTML output
@@ -154,7 +155,7 @@ GENERATE_LATEX         = YES
 # If a relative path is entered the value of OUTPUT_DIRECTORY will be 
 # put in front of it. If left blank `latex' will be used as the default path.
 
-LATEX_OUTPUT           = latex-posix
+LATEX_OUTPUT           = latex-cobalt
 
 # The LATEX_CMD_NAME tag can be used to specify the LaTeX command name to be 
 # invoked. If left blank `latex' will be used as the default command name.
@@ -230,5 +231,5 @@ LATEX_HIDE_INDICES     = NO
 INCLUDE_PATH           = \
 @top_builddir@/include \
 @top_srcdir@/include \
-@top_srcdir@/include/posix \
+@top_srcdir@/include/cobalt \
 
diff --git a/doc/doxygen/Doxyfile-common.in b/doc/doxygen/Doxyfile-common.in
index 86b2468..1b6518f 100644
--- a/doc/doxygen/Doxyfile-common.in
+++ b/doc/doxygen/Doxyfile-common.in
@@ -38,16 +38,6 @@ OUTPUT_DIRECTORY       = .
 
 OUTPUT_LANGUAGE        = English
 
-# This tag can be used to specify the encoding used in the generated output. 
-# The encoding is not always determined by the language that is chosen, 
-# but also whether or not the output is meant for Windows or non-Windows 
users. 
-# In case there is a difference, setting the USE_WINDOWS_ENCODING tag to YES 
-# forces the Windows encoding (this is the default for the Windows binary), 
-# whereas setting the tag to NO uses a Unix-style encoding (the default for 
-# all platforms other than Windows).
-
-USE_WINDOWS_ENCODING   = NO
-
 # If the BRIEF_MEMBER_DESC tag is set to YES (the default) Doxygen will 
 # include brief member descriptions after the members that are listed in 
 # the file and class documentation (similar to JavaDoc). 
@@ -110,13 +100,6 @@ JAVADOC_AUTOBRIEF      = YES
 
 MULTILINE_CPP_IS_BRIEF = NO
 
-# If the DETAILS_AT_TOP tag is set to YES then Doxygen 
-# will output the detailed description near the top, like JavaDoc.
-# If set to NO, the detailed description appears after the member 
-# documentation.
-
-DETAILS_AT_TOP         = YES
-
 # If the INHERIT_DOCS tag is set to YES (the default) then an undocumented 
 # member inherits the documentation from any documented member that it 
 # reimplements.
@@ -844,22 +827,6 @@ DOT_PATH               =
 
 DOTFILE_DIRS           = 
 
-# The MAX_DOT_GRAPH_WIDTH tag can be used to set the maximum allowed width 
-# (in pixels) of the graphs generated by dot. If a graph becomes larger than 
-# this value, doxygen will try to truncate the graph, so that it fits within 
-# the specified constraint. Beware that most browsers cannot cope with very 
-# large images.
-
-MAX_DOT_GRAPH_WIDTH    = 1024
-
-# The MAX_DOT_GRAPH_HEIGHT tag can be used to set the maximum allows height 
-# (in pixels) of the graphs generated by dot. If a graph becomes larger than 
-# this value, doxygen will try to truncate the graph, so that it fits within 
-# the specified constraint. Beware that most browsers cannot cope with very 
-# large images.
-
-MAX_DOT_GRAPH_HEIGHT   = 1024
-
 # The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the 
 # graphs generated by dot. A depth value of 3 means that only nodes reachable 
 # from the root by following a path via at most 3 edges will be shown. Nodes 
diff --git a/doc/doxygen/Doxyfile-nucleus.in b/doc/doxygen/Doxyfile-nucleus.in
index 4b9a53c..6c377a8 100644
--- a/doc/doxygen/Doxyfile-nucleus.in
+++ b/doc/doxygen/Doxyfile-nucleus.in
@@ -5,7 +5,7 @@
 # The PROJECT_NAME tag is a single word (or a sequence of words surrounded 
 # by quotes) that should identify the project.
 
-PROJECT_NAME           = "Xenomai nanokernel API"
+PROJECT_NAME           = "Xenomai core"
 
 # The INPUT tag can be used to specify the files and/or directories that 
contain 
 # documented source files. You may enter file names like "myfile.cpp" or 
@@ -13,8 +13,8 @@ PROJECT_NAME           = "Xenomai nanokernel API"
 # with spaces.
 
 INPUT                  = \
-        @top_srcdir@/include/nucleus \
-        @top_srcdir@/kernel/cobalt \
+        @top_srcdir@/include/cobalt/nucleus \
+        @top_srcdir@/kernel/cobalt/nucleus \
         @top_srcdir@/doc/doxygen
 
 #---------------------------------------------------------------------------
diff --git a/doc/doxygen/Doxyfile-rtdm.in b/doc/doxygen/Doxyfile-rtdm.in
index 3cd9263..37c93c0 100644
--- a/doc/doxygen/Doxyfile-rtdm.in
+++ b/doc/doxygen/Doxyfile-rtdm.in
@@ -14,7 +14,6 @@ PROJECT_NAME           = "Xenomai RTDM skin API"
 
 INPUT                  = \
         @top_srcdir@/include/rtdm \
-        @top_srcdir@/lib/rtdm \
         @top_srcdir@/kernel/cobalt/rtdm \
         @top_srcdir@/doc/doxygen
 
@@ -22,8 +21,7 @@ INPUT                  = \
 # directories that contain example code fragments that are included (see 
 # the \include command).
 
-EXAMPLE_PATH           = @top_srcdir@/utils \
-                        @top_srcdir@/examples/rtdm
+EXAMPLE_PATH           = @top_srcdir@/utils
 
 #---------------------------------------------------------------------------
 # configuration options related to the HTML output
diff --git a/doc/doxygen/Doxyfile.in b/doc/doxygen/Doxyfile.in
index 24501b0..347077a 100644
--- a/doc/doxygen/Doxyfile.in
+++ b/doc/doxygen/Doxyfile.in
@@ -5,7 +5,7 @@
 # The PROJECT_NAME tag is a single word (or a sequence of words surrounded 
 # by quotes) that should identify the project.
 
-PROJECT_NAME           = "Xenomai API"
+PROJECT_NAME           = "Xenomai"
 
 
 #---------------------------------------------------------------------------
@@ -18,13 +18,14 @@ PROJECT_NAME           = "Xenomai API"
 # with spaces.
 
 INPUT                  = \
-        @top_srcdir@/include/nucleus \
+        @top_srcdir@/include/cobalt/nucleus \
         @top_srcdir@/kernel/cobalt \
-        @top_srcdir@/include/native \
-        @top_srcdir@/lib/native \
+        @top_srcdir@/include/copperplate \
+        @top_srcdir@/include/alchemy \
         @top_srcdir@/include/rtdm \
-        @top_srcdir@/lib/rtdm \
         @top_srcdir@/include/analogy \
+        @top_srcdir@/lib/copperplate \
+        @top_srcdir@/lib/alchemy \
         @top_srcdir@/lib/analogy \
         @top_srcdir@/kernel/drivers/analogy \
         @top_srcdir@/doc/doxygen
@@ -33,8 +34,7 @@ INPUT                  = \
 # directories that contain example code fragments that are included (see 
 # the \include command).
 
-EXAMPLE_PATH           = @top_srcdir@/utils \
-                        @top_srcdir@/examples
+EXAMPLE_PATH           = @top_srcdir@/utils
 
 #---------------------------------------------------------------------------
 # configuration options related to the HTML output
@@ -246,5 +246,10 @@ INCLUDE_PATH           = \
 @top_srcdir@/kernel/drivers \
 @top_builddir@/include \
 @top_srcdir@/include \
-@top_srcdir@/include/posix \
-@top_srcdir@/include/analogy \
+@top_srcdir@/include/copperplate \
+@top_srcdir@/include/cobalt \
+@top_srcdir@/include/cobalt/nucleus \
+@top_srcdir@/include/alchemy \
+@top_srcdir@/include/psos \
+@top_srcdir@/include/vxworks \
+@top_srcdir@/include/analogy
diff --git a/doc/doxygen/Makefile.am b/doc/doxygen/Makefile.am
index 48ca321..0ff3e42 100644
--- a/doc/doxygen/Makefile.am
+++ b/doc/doxygen/Makefile.am
@@ -1,9 +1,9 @@
 HTML_DOCS=api api/search
-PDF_DOCS= nucleus-api.pdf posix-api.pdf rtdm-api.pdf
+PDF_DOCS= nucleus-api.pdf cobalt-api.pdf rtdm-api.pdf
 
 EXTRA_DIST = \
        Doxyfile.in Doxyfile-common.in Doxyfile-nucleus.in \
-       Doxyfile-posix.in Doxyfile-rtdm.in
+       Doxyfile-cobalt.in Doxyfile-rtdm.in
 
 if !CONFIG_XENO_DOC_DOX
 HTML_DOCSDIR = $(srcdir)/../generated/html/
diff --git a/doc/doxygen/Makefile.in b/doc/doxygen/Makefile.in
index b593a15..27db1a8 100644
--- a/doc/doxygen/Makefile.in
+++ b/doc/doxygen/Makefile.in
@@ -34,8 +34,8 @@ POST_UNINSTALL = :
 build_triplet = @build@
 host_triplet = @host@
 target_triplet = @target@
-DIST_COMMON = $(srcdir)/Doxyfile-common.in \
-       $(srcdir)/Doxyfile-nucleus.in $(srcdir)/Doxyfile-posix.in \
+DIST_COMMON = $(srcdir)/Doxyfile-cobalt.in \
+       $(srcdir)/Doxyfile-common.in $(srcdir)/Doxyfile-nucleus.in \
        $(srcdir)/Doxyfile-rtdm.in $(srcdir)/Doxyfile.in \
        $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
        $(top_srcdir)/doc/install-dist.rules
@@ -54,7 +54,7 @@ am__configure_deps = $(am__aclocal_m4_deps) 
$(CONFIGURE_DEPENDENCIES) \
 mkinstalldirs = $(install_sh) -d
 CONFIG_HEADER = $(top_builddir)/lib/include/xeno_config.h
 CONFIG_CLEAN_FILES = Doxyfile-common Doxyfile Doxyfile-nucleus \
-       Doxyfile-posix Doxyfile-rtdm
+       Doxyfile-cobalt Doxyfile-rtdm
 CONFIG_CLEAN_VPATH_FILES =
 SOURCES =
 DIST_SOURCES =
@@ -232,10 +232,10 @@ top_build_prefix = @top_build_prefix@
 top_builddir = @top_builddir@
 top_srcdir = @top_srcdir@
 HTML_DOCS = api api/search
-PDF_DOCS = nucleus-api.pdf posix-api.pdf rtdm-api.pdf
+PDF_DOCS = nucleus-api.pdf cobalt-api.pdf rtdm-api.pdf
 EXTRA_DIST = \
        Doxyfile.in Doxyfile-common.in Doxyfile-nucleus.in \
-       Doxyfile-posix.in Doxyfile-rtdm.in
+       Doxyfile-cobalt.in Doxyfile-rtdm.in
 
 @CONFIG_XENO_DOC_DOX_FALSE@HTML_DOCSDIR = $(srcdir)/../generated/html/
 @CONFIG_XENO_DOC_DOX_TRUE@HTML_DOCSDIR = ./
@@ -282,7 +282,7 @@ Doxyfile: $(top_builddir)/config.status 
$(srcdir)/Doxyfile.in
        cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
 Doxyfile-nucleus: $(top_builddir)/config.status $(srcdir)/Doxyfile-nucleus.in
        cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
-Doxyfile-posix: $(top_builddir)/config.status $(srcdir)/Doxyfile-posix.in
+Doxyfile-cobalt: $(top_builddir)/config.status $(srcdir)/Doxyfile-cobalt.in
        cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
 Doxyfile-rtdm: $(top_builddir)/config.status $(srcdir)/Doxyfile-rtdm.in
        cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
diff --git a/doc/man/Makefile.am b/doc/man/Makefile.am
index a2357a0..71cb1e8 100644
--- a/doc/man/Makefile.am
+++ b/doc/man/Makefile.am
@@ -2,7 +2,6 @@
 man1_MANS = \
        clocktest.man \
        cyclictest.man \
-       klatency.man \
        latency.man \
        rtcanconfig.man \
        rtcanrecv.man \
diff --git a/doc/man/Makefile.in b/doc/man/Makefile.in
index ac9d885..39bd7e7 100644
--- a/doc/man/Makefile.in
+++ b/doc/man/Makefile.in
@@ -248,7 +248,6 @@ top_srcdir = @top_srcdir@
 man1_MANS = \
        clocktest.man \
        cyclictest.man \
-       klatency.man \
        latency.man \
        rtcanconfig.man \
        rtcanrecv.man \
diff --git a/doc/txt/Makefile.am b/doc/txt/Makefile.am
index d822037..65cfbd3 100644
--- a/doc/txt/Makefile.am
+++ b/doc/txt/Makefile.am
@@ -2,4 +2,4 @@ txtdocdir = $(docdir)/txt
 
 dist_txtdoc_DATA = \
        16550A-driver.txt \
-       pse51-skin.txt
+       cobalt-skin.txt
diff --git a/doc/txt/Makefile.in b/doc/txt/Makefile.in
index a0f0e37..1a2aca7 100644
--- a/doc/txt/Makefile.in
+++ b/doc/txt/Makefile.in
@@ -241,7 +241,7 @@ top_srcdir = @top_srcdir@
 txtdocdir = $(docdir)/txt
 dist_txtdoc_DATA = \
        16550A-driver.txt \
-       pse51-skin.txt
+       cobalt-skin.txt
 
 all: all-am
 


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