Hello Tiago--

> Thank you for the answer.
> Yes i´m referring to the energy. 
> Ok, so in this case the principal observable would be the chi^2 to the
> experimental saxs data i imagine.
> Is there any option to do a softer refinement? Maybe lowering the ini_t? Any
> other parameter that i´m missing?


Lowering init_t will make refinement more gentle. Also, the refRMSD
term can be used as an energy term- restraining your structure to a
reference structure. Simply append this term to potList, and make
certain the selection excludes the poorly define regions, and it may
help.

best regards--
Charles

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