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Hello Blanton-- > I would like to refine an RNA molecule using only NOE and scalar > coupling data. I have searched the egin directory, but the only > stripped down refinement protocol I've found is for protG. Does > anyone know of a similar protocol that can be used for RNA? I am new > to xplor-nih having used CNS in the past. In CNS, there were > significantly less refinement protocols to select from. Any advice > that can be given will be greatly appreciated. You might start with rna_refi/rna_database_refine.inp and strip out the RDC stuff. You will probably need the database potentials to get far. Another approach would be to start from dna_refi/refine_full.py, (again removing rdc stuff). best regards-- Charles -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.5 (GNU/Linux) Comment: Processed by Mailcrypt 3.5.8 <http://mailcrypt.sourceforge.net/> iD8DBQFFdtS8PK2zrJwS/lYRAooPAJ46t517dkW7Zwny10onhu0i6dmLGgCfYOu/ YxO4DUTT1z6TR/pmlE7lAYQ= =NsEy -----END PGP SIGNATURE-----
