Hi Gary, Peaks that are extremely close to the diagonal are actually deleted. Since the number of missing peaks is small, that's probably what's happening. There should be some mention of them being removed in the pass1 .peaks file(s). Search through for the comments at the top of the file for a line of the form, "X of Y peaks were dropped because of proximity < Z ppm to the diagonal"
I should probably make this a bit more verbose, listing off their peak IDs specifically. Hope this helps, JK On Aug 8, 2007, at 7:22 PM, gary thompson wrote: > Dear All > > I have a peak list I am putting into marvin/pasd which has 1644 > peaks, however, once all the filtering and calculation has > completed I end up with 1579 peaks. What causes peaks to be removed > from the marvin peak lists rather than carrying through without > assignments? I can find no remarks in the ouputs about the deleted > peaks > > regards > gary > > _______________________________________________ > Xplor-nih mailing list > Xplor-nih at nmr.cit.nih.gov > http://dcb.cit.nih.gov/mailman/listinfo/xplor-nih
