On Wednesday 15 August 2007 16:27, S W Simon Sham wrote:
> When I configured vmd-xplor, I simmply typed in /configure -xplor
> /usr/local/xplor-nih-2.18/bin/xplor.
> And it was installed.
I had to run the configure script as root. Now I have no error message.
When I'm trying to start vmd-xplor as user the "vmd_LINUX window" (the console
like window) appears but no other window. Don't know what to do (maybe my
work day was too long already).
Here's the debug output from vmd-xplor:
./vmd-xplor -debug
********** vmd-xplor **********
* version: 1.5 *
* please send feedback to *
* vmd-xplor at nmr.cit.nih.gov *
*********************************
+ args=' -debug'
+ '[' ']'
+ export START_STRUCTURES
++ echo :0
++ sed 's/\([^:]*\):.*/\1/'
+ DISPLAY_HOST=
+ '[' '!' '(' '' = '' -o '' = unix ')' ']'
++ uname -s
+ MACHARCH=Linux
+ LOAD_PATH_VAR=LD_LIBRARY_PATH
+ so_suffix=so
+ case "$MACHARCH" in
+ VMD_ARCH=LINUX
+ VMD_WINOPTS=-e
+ VMDXPLOR=/opt/vmd-xplor-1.5-Linux_2.4_i686
+ VMDXPLOR_BINDIR=/opt/vmd-xplor-1.5-Linux_2.4_i686/bin.LINUX
+ VMDDIR=/usr/local/lib/vmd/
+ VMD_BINDIR=/usr/local/lib/vmd//LINUX
+ VMDXPLOR_HELP=/opt/vmd-xplor-1.5-Linux_2.4_i686/help
+ VMDXPLORLIB=/opt/vmd-xplor-1.5-Linux_2.4_i686/bin.LINUX/libvmdX.so
+ export VMDXPLORLIB
++ echo :0
++ sed 's/^:/unix:/'
+ DISPLAY=unix:0
+ vmdbasename=vmd
+ consumer=namd_consumer
+
PATH=/opt/vmd-xplor-1.5-Linux_2.4_i686/bin.LINUX:/opt/xplor-nih-2.18/bin:/opt/vmd-xplor-1.5-Linux_2.4_i686/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/X11R6/bin:/opt/gnome/bin:/opt/kde3/bin:/usr/bin/X11:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/usr/sbin
+ export PATH
+
PYTHONPATH=/opt/vmd-xplor-1.5-Linux_2.4_i686/bin.LINUX/python_libs:/opt/vmd-xplor-1.5-Linux_2.4_i686/scripts
+ TCL_LIBRARY=/usr/local/lib/vmd//scripts/tcl
+ TCLX_LIBRARY=/usr/local/lib/vmd//scripts/tclX
+ TKX_LIBRARY=/usr/local/lib/vmd//scripts/tkX
+ export TCL_LIBRARY TCLX_LIBRARY TKX_LIBRARY PYTHONPATH
+ POVINI=/usr/local/lib/vmd//lib/povray31/povray.ini
+ eval 'LOAD_PATH=$LD_LIBRARY_PATH'
++ LOAD_PATH=
+
LOAD_PATH=/opt/vmd-xplor-1.5-Linux_2.4_i686/bin.LINUX:/usr/local/lib/vmd//LINUX:
+ MESA_PATH=
+ '[' '' ']'
+ EXTRA_LIBS_PATH=
+ '[' '' ']'
+ eval
LD_LIBRARY_PATH=/opt/vmd-xplor-1.5-Linux_2.4_i686/bin.LINUX:/usr/local/lib/vmd//LINUX:
++
LD_LIBRARY_PATH=/opt/vmd-xplor-1.5-Linux_2.4_i686/bin.LINUX:/usr/local/lib/vmd//LINUX:
+ export LD_LIBRARY_PATH
+ export XTERM VMDXPLOR VMDXPLORBIN VMDDIR VMDXPLOR_HELP DP_PORT DISPLAY
NOXPLOR NOPYTHON
+ POVINI=/home/schwitrs/vmd/IRIX6/lib/povray31/povray.ini
+ '[' 0 -eq 0 ']'
+ '[' -x /usr/local/lib/vmd//LINUX/surf_LINUX ']'
+ '[' 0 -eq 0 ']'
+ '[' -x /usr/local/lib/vmd//LINUX/stride_LINUX ']'
+ '[' 0 -eq 0 ']'
+ '[' -x /usr/local/lib/vmd//LINUX/povray ']'
+ '[' 0 -eq 0 ']'
+ '[' -x /usr/local/lib/vmd//LINUX/tachyon_LINUX ']'
+ '[' 0 -eq 0 ']'
+ MDC_CONSUMER=/usr/local/lib/vmd//LINUX/mdcomm/bin_LINUX/namd_consumer
+ export MDC_CONSUMER
++ uname -sr
++ sed 's/ /_/g'
+ ARCH=Linux_2.6.18.8-0.5-default
+ export ARCH
+ mkdir /var/tmp/roeben-ve0
+ vmd_cmd=/usr/local/lib/vmd//LINUX/vmd_LINUX
+
vmd_cmd='/usr/local/lib/vmd//LINUX/vmd_LINUX -startup
/opt/vmd-xplor-1.5-Linux_2.4_i686/scripts/vmd.init'
+
vmd_cmd='/usr/local/lib/vmd//LINUX/vmd_LINUX -startup
/opt/vmd-xplor-1.5-Linux_2.4_i686/scripts/vmd.init -size
700 700 -pos 225 324 -nt -debug'
+ '[' 0 -eq 0 ']'
+ '[' 0 -eq 1 ']'
+ rxvt -iconic -geometry
80x24+0-0 -e /usr/local/lib/vmd//LINUX/vmd_LINUX -startup
/opt/vmd-xplor-1.5-Linux_2.4_i686/scripts/vmd.init -size
700 700 -pos 225 324 -nt -debug
+ '[' 0 -eq 0 ']'
+ '[' 0 -eq 0 -a SS = DP ']'
+ rm -rf /var/tmp/roeben-ve0
best regards
Marco
--
Dipl. Chem. Marco R?ben
Leibniz Institute of Molecular Pharmacology (FMP)
dep.: Solution NMR
Robert-R?ssle-Str. 10
D-13125 Berlin
+49-30-94793224 (phone)
+49-030-94793169 (fax)
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