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Hello Theresa-- > > My question is how to use the radius of gyration, collapse term for a > homodimer in the Xplor refinement script. Specifically, I'm > interested in a domain swapped homodimer that has a very intertwined > structure (but is still very globular). Do I only "assign" the > residues in one subunit and then use double the expected radius of > gyration? I am also using NCS symmetry in the refinement. Treating the whole dimer as a single domain may work. i.e. selecting all residues and using the expected radius for them. If the structure is expected to be extended then the Gyration Volume term would be a better choice. hope this helps-- Charles -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.9 (GNU/Linux) Comment: Processed by Mailcrypt 3.5.8+ <http://mailcrypt.sourceforge.net/> iD8DBQFIyXVKPK2zrJwS/lYRAgHeAJ9N8dD2KriPCBbS6q/3yXSiCOmDGwCcDRuT PLyLtFCSY3Aom+bRa9T42XM= =HyBW -----END PGP SIGNATURE-----
