Hello ...
I am trying to use the 'refine.py' to refine the structures generated under
cyana 2.1. Unfortunately, I get the following error.
(protocol.loadPDB("test_i.pdb"
)). I tried to save the file in various formats (IUPAC/xplor or pdb) using
the 'translate' option with cyana, same error!
PDBTool:read: atom not found in structure: A SER 1 HB3(name converted from
3HB)
PDBTool:read: atom not found in structure: A SER 1 HB'(name converted from
HB*)
PDBTool:read: atom not found in structure: A LYS 2 H
PDBTool:read: atom not found in structure: A LYS 2 HB3(name converted from
3HB)
would greatly appreciate a work around!
Thanks.
-- Krish.
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