Hello everyone,
I am trying to generate a peptide structure based on
a set of NOE distance restraints using 'Sa.inp'. After refining the structure I
get a set of acceptable structures with RMSDs between 0.5-0.7 but when I try to
generate a Ramachandran plot most of them(60-70%) lie in unacceptable regions.
I have checked my NOEs thoroughly and am quite confident of them. could
anyone help me see where I am going wrong
thanks
Kunal Bakshi
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