Hi Anton,

you are right, changing the script as follows has the same effect:

# -*- coding: utf-8
import subprocess

numberTests = 10

for z in range(numberTests):
        #O.reset()
        
        bodies= 
O.bodies.append(pack.regularHexa(pack.inSphere((Vector3(0.0,0.0,0.0)),0.5),radius=0.01,gap=0))
        print "number of bodies:", len(O.bodies)

        for b in bodies:
                O.bodies.erase(b)

        cmd = "ps -o vsz -p `pgrep yade` | grep -v VSZ"
        process = subprocess.Popen(cmd, stdout=subprocess.PIPE, shell=True)
        meminfo = process.communicate()[0].strip()
        print "Yade memory usage: ", meminfo, "kB"
        
        cmd = "egrep 'MemFree' /proc/meminfo"
        process = subprocess.Popen(cmd, stdout=subprocess.PIPE, shell=True)
        meminfo = process.communicate()[0]
        print meminfo

sys.exit(0)

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https://bugs.launchpad.net/bugs/1290194

Title:
  O.reset() does not free memory

Status in Yet Another Dynamic Engine:
  New

Bug description:
  O.reset() does not free the memory, i.e. if you run a series of
  simulations in a loop the memory usage is accumulating. Here is a
  script which reproduces the issue (it should affect all versions):

  # -*- coding: utf-8
  import subprocess

  numberTests = 10

  for z in range(numberTests):
        
        O.reset()
        
        
O.bodies.append(pack.regularHexa(pack.inSphere((Vector3(0.0,0.0,0.0)),0.5),radius=0.01,gap=0))
        print "number of bodies:", len(O.bodies)

        cmd = "ps -o vsz -p `pgrep yade` | grep -v VSZ"
        process = subprocess.Popen(cmd, stdout=subprocess.PIPE, shell=True)
        meminfo = process.communicate()[0].strip()
        print "Yade memory usage: ", meminfo, "kB"
        
        cmd = "egrep 'MemFree' /proc/meminfo"
        process = subprocess.Popen(cmd, stdout=subprocess.PIPE, shell=True)
        meminfo = process.communicate()[0]
        print meminfo

  sys.exit(0)

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