Thanks for your insights, Derick. Through a long process of trial and error I 
have now managed to solve the problem. As it was fairly complicated, and as 
others might benefit from knowing what I did, I wrote a blog entry to describe 
the process that worked for me: http://wp.me/pKXV8-ts

Cheers,

Matt.

On 17 Dec 2010, at 21:16, Derick Centeno wrote:

> Questions:
> You can boot from the original second drive but not from it's replacement??
> 
> Are you familiar with the application within YDL known as parted (aka: 
> partition editor)?  It can reveal a rather precise layout of the partition 
> table for each of the disks in question which would allow you to more 
> precisely determine the location of the partitions as well as the file 
> systems used within each partition.  Hopefully these details could provide 
> essential information useful in analyzing this problem you reported.
> 
> Suggestion:
> Keep a record of each disk's partition table and file system; compare each 
> one to the other two.
> Perhaps the copy or duplication routine implemented by the software used in 
> creating each of the drives is the source of your difficulties; I'm guessing 
> of course.  However, parted would report what consumer grade Apple software 
> cannot because Apple software cannot see ext2/3.  However, Apple Server 
> software could be different; I'm not sure.  My focus for some years has been 
> Unix/Linux, not Apple.
> 
> If you have the hfstools installed within YDL (use yum) you should be able to 
> see, write to, use and create whatever partition structure and filesystem you 
> need in the order you need it to be.
> 
> Supposition:
> When TerraSoft existed and Apple produced PowerPCs there existed a 
> recommended two-step installation process which involved using Apple's 
> Partitioning tool first so that it created the partitions for Apple's OS and 
> the partition format known as Free Space - at the same time.  The second 
> installation process involved booting from the YDL installation DVD to 
> initiate Anaconda to install YDL; the options at that point eventually 
> allowed for either choosing an automated installation process which allowed 
> Anaconda to build ext3 on those partitions it recognized as suitable for 
> Linux, or manually choosing the partition to proceed with the installation 
> process.
> 
> I am not sure that the above procedure was the same for Apple Servers; it 
> should be an area for you to explore carefully.  The problem you report 
> sounds like something caused by a missed step or error in one or another step 
> of preparing Apple hardware to function seamlessly with YDL.  If a review or 
> re-examination of implemented procedures reveal that no errors were made then 
> it may be time to replace the "spare" completely with a new drive as all 
> other methods will have been explored and implemented first.
> 
> Good Luck...
> 
> 
> On 12/17/10 7:30 AM, Matt Brock wrote:
>> Yes, that's exactly right. The spare is set up in just that way, and when I 
>> bring it into the array it works fine as the second disk once the sync 
>> process is completed. The only problem is that I can't get the server to 
>> boot off that new second disk, and that's what's frustrating me.
>> 
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