I would really like to see an annotations-function for webarchives like the Firefox-Plugin "Zotero" (http://www.zotero.org/) is doing it (You can markup stuff in a webarchive you archived with it).

In addition I would like to choose the external PDF-application. It would be real great if there was Skim-support - therefore having the annotations/notes right in Yojimbo (or at least let them stay with the file when I open a PDF from Yojimbo in Skim)


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