I have figured out how to get Yojimbo to add the PDF to multiple folder collections (see below).

Does anyone know how I could also encrypt the PDF in applescript as well?

[code]
----------------------------------------------------------
-- Save PDF to Yojimbo and Tag
--
-- Allows you to rename and add tags to a Yojimbo item you add using print
-- to PDF.
--
-- Save as a script to ~Library/PDF Services
----------------------------------------------------------
on open (theFile)

        ----------------------------------------------------------
-- set chooseTagsfromList to true if you want the script to present you with -- a list of tags to pick from. Set it to false if you want to manually enter the
        -- tags. If you manually enter tags, separate tags with commas.
        ----------------------------------------------------------

        set chooseTagsFromList to true
        set chooseCollectionsFromList to true
        set theName to text returned of (display dialog "Name:" default answer 
"")

        if not chooseTagsFromList then
                set restoreDelimiters to AppleScript's text item delimiters

                set AppleScript's text item delimiters to ","
                set theTags to text returned of (display dialog "Tags:" default answer 
"")

                set the chosenTagList to every text item of theTags
        end if


        tell application "Yojimbo"

                set allTags to name of every tag
                if chooseTagsFromList then
                        set chosenTagList to choose from list allTags ¬
                                with title ¬
                                "Tags" with prompt ¬
                                ¬
                                        "Choose Tags:" multiple selections 
allowed true ¬
                                with empty selection allowed
                end if

                set allCollections to (name of every folder collection)
                if chooseCollectionsFromList then
                        set chosenCollectionList to choose from list 
allCollections ¬
                                with title ¬
                                "Collections" with prompt ¬
                                ¬
                                        "Add PDF to which collection?" multiple 
selections allowed true ¬
                                with empty selection allowed
                end if

                set n to import theFile
                set name of n to theName
                add tags chosenTagList to n
                repeat with i from 1 to the count of chosenCollectionList
                        add n to folder collection named (item i of 
chosenCollectionList)
                end repeat

        end tell

        if not chooseTagsFromList then
                set AppleScript's text item delimiters to restoreDelimiters
        end if
end open
[/code]

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