Two questions:
1. yum-verify, when run as user, reports far more issues than when run as
root. Which should I trust and why?
2. Are the reports below (from run as root) indications of a serious
problem?
Thank you for your help!
-Philip

Details:
1. When I ran yum-verify as root, it reported 47 problems, 8 files have
wrong checksums and wrong sizes, 3 files are missing, 2 groups, 10 mtimes,
and 16 modes do not match. When I ran it as user, it reported 1166 wrong
checksum and sizes, etc, and other errors, of which only 452 were
permission denied complaints.


2. The problems that were reported (when running as root) were:
cryptopp.x86_64 : C++ class library of cryptographic schemes
    File: /usr/lib64/libcryptopp.so.6.0.0
        Problem:  checksum does not match
        Current:
 sha256:ed2f9eecc0f1d4381cc3ff2fc4d8d6174c68beb63d235b06e99b7d611dc4a738
        Original:
sha256:1f005bb7d0f2c00c5b61fd1e4fa8b038667c30e56064b21518bee4eb0658a21d
                                   --------

        Problem:  size does not match
        Current:       5391696 B
        Original:      5388928 B

leveldb.x86_64 : A fast and lightweight key/value database library by Google
    File: /usr/lib64/libleveldb.so.1.0.7
        Problem:  checksum does not match
        Current:
 sha256:8b9cb3df3f16f7e88fc647bf02b33cf1be761a64ae3af2c5afd42377f65da516
        Original:
sha256:fda158f5387bfab5884f8612d65d6a640b909ed27a8e6e6ec7d7caf39ac478b1
                                   --------

        Problem:  size does not match
        Current:  343 k
        Original: 341 k

libiscsi.x86_64 : iSCSI client library
    File: /usr/lib64/iscsi/libiscsi.so.2.0.10900
        Problem:  checksum does not match
        Current:
 sha256:439a29574f7b27a55d5632eb3fd63e288923164d23a7e6ad562e5a7778206a07
        Original:
sha256:e88ae7d97448dc3feb6c4551d1fcf79e9302893b19a5e86eb93b39b4706a1530
                                   --------

        Problem:  size does not match
        Current:  124 k
        Original: 122 k

libreswan.x86_64 : IPsec implementation with IKEv1 and IKEv2 keying
protocols
    File: /var/run/pluto
        Problem:  file is missing

libunwind.x86_64 : An unwinding library
    File: /usr/lib64/libunwind-coredump.so.0.0.0
        Problem:  checksum does not match
        Current:
 sha256:5d85cf84855c8c4403456ac61d5639a7a6ad9c77f06ae831a74c51bfc59d0fd9
        Original:
sha256:9826bde159db2d7bafb9214d88679969c46f5ac06de35c6fc6c4163fb399f1d3
                                   --------

        Problem:  size does not match
        Current:   16 k
        Original:  14 k
    File: /usr/lib64/libunwind-x86_64.so.8.0.1
        Problem:  checksum does not match
        Current:
 sha256:09a797a2f869bd96747dc8ed5e31469ee1bd4d8a19635c2744ea12fa2080bf53
        Original:
sha256:717b4759a4677e1fe10ca3b2bc19ade67a9940424d44037ad4a53c2cc2f3f93a
                                   --------

        Problem:  size does not match
        Current:   70 k
        Original:  67 k

nfs-utils.x86_64 : NFS utilities and supporting clients and daemons for the
                 : kernel NFS server
    File: /var/lib/nfs/rpc_pipefs
        Problem:  mode does not match
        Current:  user:-rx, group:-rx, other:-rx
        Original: user:wrx, group:-rx, other:-rx

protobuf-c.x86_64 : C bindings for Google's Protocol Buffers
    File: /usr/lib64/libprotobuf-c.so.0.0.0
        Problem:  checksum does not match
        Current:
 sha256:ab4e3232463bb7120ed950b79933ec75bb558e6c4f7bb71981cf1c12b175505e
        Original:
sha256:ec756fcc219a6d91aa9bed5edc5af264b53dd07fa671d2c45c3ff18970df50d2
                                   --------

        Problem:  size does not match
        Current:   71 k
        Original:  68 k

shared-mime-info.x86_64 : Shared MIME information database
    File: /usr/share/applications/defaults.list
        Problem:  checksum does not match
        Current:
 sha256:4b0706acadebedb072a962b89a225ab6e86cffde24315dda344806d9114ae129
        Original:
sha256:e6e69b9fdadf56d354cc221c4b1509a25271660d7bc7240c089485d430cff186
                                   --------

        Problem:  size does not match
        Current:         13526 B
        Original:        13305 B
                                   --------

        Problem:  mtime does not match
        Current:  Fri Jul 18 11:49:17 2014 (15 days, 22:17:39 later)
        Original: Wed Jul  2 13:31:38 2014

speex.x86_64 : A voice compression format (codec)
    File: /usr/lib64/libspeexdsp.so.1.5.0
        Problem:  checksum does not match
        Current:
 sha256:a223b35d537c310e9a522eef4ad69fcea2cd2f31e21366ec9095182d40683926
        Original:
sha256:9e0de2dac7e8de8d0e95b16049dca89be2ef1f8efbb3c6f18f659436a5f1e605
                                   --------

        Problem:  size does not match
        Current:   80 k
        Original:  77 k



There were also:
10 "mtime does not match": (All 1:00:01 earlier!) :
/usr/share/applications/defaults.list,
/boot/efi/EFI/BOOT/{BOOTX64.EFI, fallback.efi},
/boot/efi/EFI/fedora/{fonts/unicode.pf2, gcdx64.efi, grubx64.efi,BOOT.CSV,
MokManager.efi,shim-fedora.efi,shim.efi} .

16 "mode does not match": /,/sys, /var/log/gdm, /var/lib/nfs/rpc_pipefs,
/var/log/journal ,
/boot/efi/EFI/BOOT/{BOOTX64.EFI, fallback.efi} ,
/boot/efi/EFI/fedora{/, gcdx64.efi, grubx64.efi, BOOT.CSV,
MokManager.efi,shim-fedora.efi,shim.efi, fonts{/,unicode.pf2}} .

2 "group does not match":  /var/log/gdm, /var/log/journal (but they were
changed from root to gdm and system-journal, so that's not surprising,
right?)

3 "file is missing": /var/run/gluster, /var/run/pluto,
/var/run/wpa_supplicant .
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