Thanks for the reply.  Too bad you can't wait for SHA3.  Now you'll  
have to think about whether new cryptanalytic results against SHA-256  
mean that SHA-256-trunc-160 is vulnerable and if so what effect that  
has on the safety of your scheme.

But, I don't have a better solution for you, other than Nico  
Williams's proposal to put a MAC on only the root, which you've  
already rejected as being too disruptive of a change at this point.

Regards,

Zooko
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